Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_007497.1 Length=44856 Score E Sequences producing significant alignments: (Bits) Value seq202768 450 4e-122 seq236429 399 6e-107 seq79893 89.7 1e-13 >seq202768 Length=2620 Score = 450 bits (498), Expect = 4e-122 Identities = 738/1050 (70%), Gaps = 18/1050 (2%) Strand=Plus/Plus Query 43235 CCCAATAAG-TCGTCAAGGCCGCCGCCATCGATACCAGCGGCGATCACCTCACATTGTTC 43293 ||||| || |||||||| ||||||||||| || ||| ||| ||| ||||| || | | Sbjct 322 CCCAAGCAGATCGTCAAGACCGCCGCCATCAATGCCAACGGTGATGACCTCGCACCGCGC 381 Query 43294 GATCAGGT-CGAGAAGCGTCACG--CGCTCCGGCAACCCTGCATTGATCCAGAAGTCTGC 43350 | | | | |||| || || || |||| ||||| |||||| || || Sbjct 382 CAGAATCTGCTTGAAG-GTTACTGACGGGTCGGC----CTGCACCTC-CCAGAACTCCGC 435 Query 43351 GCCGGCCCACCGGTCGGACCGGAGGTTCATGCCGATCTCGACGTTGAGGTGCTTCGCGAT 43410 |||||||| |||||| || || |||||||||||||| ||||| || ||||| || | Sbjct 436 ACCGGCCCAGCGGTCGTTGCGAAGATTCATGCCGATCTCTACGTTCAGATGCTTGGCAAG 495 Query 43411 GAACTGCTGGAACGATCCGTCAGTCTTGGTGCG-GATCTTGTTGAGCTGGTCCTCCAGCC 43469 |||| | | || ||| |||| |||| | ||| | || || ||||||| Sbjct 496 AAACTTGCGCAGACTGCCTTCA-TCTTCCTGCGAGCGCTTCAGGTACTCATCATCCAGCC 554 Query 43470 ATTCGGCACTGACCGACCGCCCGAGATTCGGATTCGTGATGTAGTAGTTGGCCGGATCGA 43529 | || |||||| || ||||| | ||| || || || ||||| | || | || | Sbjct 555 ACTCTTTACTGACGGAGCGCCCCATATTTGGGTTGGTAATGTAAAAATTATCAGGGTTTC 614 Query 43530 GGTAGGCTTTCGACTTCACCATCTCTTCCGGAAACTCGTACAGCACGCCGAGCGACTTCC 43589 || | | | || |||||| || ||| |||||||| || | |||||||| || | Sbjct 615 GGAATCCGTCGTTCTCCACCATATCCGGCGGGAACTCGTAAAGGATGCCGAGCGTTTTAC 674 Query 43590 GGTCGACGATTTTGCCGTCACGCACGTCGCGGTAGTACTGCAACTTCTCTTTGAACACAC 43649 ||| || ||||| || |||| ||| |||| | || |||| |||||| || | Sbjct 675 CGTCTTTAATCACTCCGTCCCGGACGTTGCGCCAGTAATCCAGTTTCTTTTTGAATACGC 734 Query 43650 CGGCCGGCGGCTCGTCGCTTTGCGTTGTCAGGATGATGACCCACCCTTCATCCCGCGACA 43709 | || || || || ||||| |||||||| ||| ||| ||||| || ||||| ||||| | Sbjct 735 CTGCAGGTGGTTCATCGCTCTGCGTTGTGAGGTAGATAACCCATCCCTCATCGCGCGATA 794 Query 43710 CCTGGCCTCCGGTCGCCTCCATGAACATCGCTTCTGCGTTCGCCCTCTTGCCGAAGACCC 43769 |||| || || ||||| |||||||| || || || || || | || ||||| | || Sbjct 795 CCTGCCCACCCAGTGCCTCAATGAACATTGCATCGGCTTTGGCGTTTTTACCGAAAAGCC 854 Query 43770 AGTGCTCGTCGATAAGAATCTTTCCTGACTTCTTGCCCGATACCGTGTCAGTGTCGGCCG 43829 | |||| |||| || || || | || || ||||||||||| || |||| || | Sbjct 855 ATAGCTCCTCGACCAGTATGCGACCCGCTTTTTTACCCGATACCGTATCGCTGTCCGCGG 914 Query 43830 CAACCACCTTCAACGACGCT--CGACTGACGCGGTGCGTTATCGTGCGGATGTGATCTTG 43887 | ||||||||||| || | || ||||||| || ||||||||||||||||| || || Sbjct 915 CCACCACCTTCAA--ACTGTTGCGGTTGACGCGATGGGTTATCGTGCGGATGTGGTCCTG 972 Query 43888 GACATGAAACAGCTCGGACAGCTCTGCATCGGCCCGGATCATCCCCGCCGCCGGTTTGAA 43947 |||||||||||| | || |||||| | || | || | ||| | ||||| || ||||| Sbjct 973 TACATGAAACAGCGCTGAAAGCTCTTCGTCTTCACGCACCATGCTGGCCGCTGGCTTGAA 1032 Query 43948 GCTGTTGTCCGCGACCTCCTTCGTCGGGGCGAGAATCAGGTGCTCTTCTTCCTCGCGCCA 44007 || ||| || || ||||| || || || || |||||||| ||||| || || ||||||| Sbjct 1033 GCAGTTATCGGCAACCTCTTTGGTTGGTGCCAGAATCAGATGCTCCTCGTCAGCGCGCCA 1092 Query 44008 ACACAAAATGACCGCCGTCAGCATGATTCCGGCCGCGATCGTCGATTTCGTATTCTTCTT 44067 || | ||| | ||||||||||| || ||||| ||||| |||||||| || |||||||| Sbjct 1093 GCAGATAATCAGTGCCGTCAGCATAATCCCGGCGGCGATTGTCGATTTGGTGTTCTTCTT 1152 Query 44068 GCTGATCAGCAGAAAGAACTCGCGGATCAGTTGCTTGCCGGTTTCGGCATCGTAGGCACC 44127 ||| |||||||| | | |||||||| || || || || | || ||| | || Sbjct 1153 GCTTATCAGCAGCCCGTATTCGCGGATACACTGTTTTCCCGTCTGCTGGTCATAGCCGCC 1212 Query 44128 GAAAATGGCCGCGACGAAATCGAAGACCCACTGCTCGCTGCATTCGCCGAAGGTCGGCTT 44187 ||||| ||| |||||||| || ||||||||||| ||| || ||||| || ||||| Sbjct 1213 AAAAATTGCCAGCACGAAATCAAATACCCACTGCTCTGAGCACTCCCCGAAAGTGGGCTT 1272 Query 44188 TCCCGGTAGGTCACAGACCCGCAGTTCCTTGAAGATCGCGACTGCCTGCTCAGCCTG-AT 44246 || || ||||| ||| || || ||||| || | || || |||| ||| | || Sbjct 1273 GCCAGGCAGGTCTGTAACCTTGAGCTCTTTGAATATGGAGAGAGCATGCT-GGCCGGAAT 1331 Query 44247 CCGGGAAAATCGGCGGCGGAATGATCGACT 44276 | | |||||| |||||||| ||||| |||| Sbjct 1332 CTGTGAAAATAGGCGGCGGGATGATTGACT 1361 >seq236429 Length=2136 Score = 399 bits (442), Expect = 6e-107 Identities = 583/819 (71%), Gaps = 4/819 (0%) Strand=Plus/Plus Query 43460 TCCTCCAGCCATTCGGCACTGACCGACCGCCCGAGATTCGGATTCGTGATGTAGTAGTTG 43519 || |||||||| || |||||| || || || | ||| || || || ||||| | || Sbjct 68 TCATCCAGCCACTCTTTACTGACGGAGCGACCCATATTTGGGTTGGTAATGTAAAAATTA 127 Query 43520 GCCGGATCGAGGTAGGCTTTCGACTTCACCATCTCTTCCGGAAACTCGTACAGCACGCCG 43579 | || | || | | | || ||||| || ||| |||||||| || | |||| Sbjct 128 TCAGGGTTTCGGAACCCGTCGTTCTCAACCATATCCGGCGGGAACTCGTAAAGGATGCCG 187 Query 43580 AGCGACTTCCGGTCGACGATTTTGCCGTCACGCACGTCGCGGTAGTACTGCAACTTCTCT 43639 |||| || | ||| || ||||| || |||| ||| |||| | || |||| | Sbjct 188 AGCGTTTTACCGTCCTTAATCACTCCGTCCCGGACGTTGCGCCAGTAATCCAGTTTCTTT 247 Query 43640 TTGAACACACCGGCCGGCGGCTCGTCGCTTTGCGTTGTCAGGATGATGACCCACCCTTCA 43699 ||||| || || || || || || ||||| |||||||| ||| ||||||||||| ||| Sbjct 248 TTGAATACGCCTGCAGGTGGTTCATCGCTCTGCGTTGTGAGGTAAATGACCCACCCCTCA 307 Query 43700 TCCCGCGACACCTGGCCTCCGGTCGCCTCCATGAACATCGCTTCTGCGTTCGCCCTCTTG 43759 || || |||||||| || || ||||| |||||||| || || || || || | ||| Sbjct 308 TCGCGTGACACCTGCCCACCCAGTGCCTCAATGAACATTGCATCGGCTTTAGCGTTTTTG 367 Query 43760 CCGAAGACCCAGTGCTCGTCGATAAGAATCTTTCCTGACTTCTTGCCCGATACCGTGTCA 43819 ||||| | ||| |||| || | || || || | || || ||||| ||||| || Sbjct 368 CCGAAAAGCCACAGCTCTTCCACCAGTATTCGCCCCGCTTTTTTACCCGAGACCGTATCG 427 Query 43820 GTGTCGGCCGCAACCACCTTCAACGACGCT-CGACTGACGCGGTGCGTTATCGTGCGGAT 43878 |||| || || |||||||||| | | | || |||||||||| || |||||||| || Sbjct 428 CTGTCCGCAGCCACCACCTTCAG-GCTGTTGCGGTTGACGCGGTGGGTGATCGTGCGAAT 486 Query 43879 GTGATCTTGGACATGAAACAGCTCGGACAGCTCTGCATCGGCCCGGATCATCCCCGCCGC 43938 ||| || || |||||||||||| | || |||||| | || | || | ||| | ||||| Sbjct 487 GTGGTCCTGTACATGAAACAGCGCTGAAAGCTCTTCGTCTTCACGCACCATGCTGGCCGC 546 Query 43939 CGGTTTGAAGCTGTTGTCCGCGACCTCCTTCGTCGGGGCGAGAATCAGGTGCTCTTCTTC 43998 || ||||||| ||| || || ||||| || || || || ||||||| |||||| || || Sbjct 547 TGGCTTGAAGCAGTTATCGGCAACCTCTTTGGTTGGTGCCAGAATCAAGTGCTCCTCGTC 606 Query 43999 CTCGCGCCAACACAAAATGACCGCCGTCAGCATGATTCCGGCCGCGATCGTCGATTTCGT 44058 ||||||| || | ||| | ||||||||||| || ||||| || || |||||||| || Sbjct 607 AGCGCGCCAGCAGATAATCAGGGCCGTCAGCATAATCCCGGCAGCAATTGTCGATTTGGT 666 Query 44059 ATTCTTCTTGCTGATCAGCAGAAAGAACTCGCGGATCAGTTGCTTGCCGGTTTCGGCATC 44118 ||||||||||| |||||||| | | |||||||| || || || || || | || Sbjct 667 GTTCTTCTTGCTTATCAGCAGGCCGTATTCGCGGATAAGCTGTTTTCCCGTCTGCTGGTC 726 Query 44119 GTAGGCACCGAAAATGGCCGCGACGAAATCGAAGACCCACTGCTCGCTGCATTCGCCGAA 44178 ||| | || ||||| ||| |||||||| || ||||||||||| ||| || ||||| Sbjct 727 ATAGCCGCCAAAAATTGCCAGCACGAAATCAAATACCCACTGCTCTGAGCACTCCCCGAA 786 Query 44179 GGTCGGCTTTCCCGGTAGGTCACAGACCCGCAGTTCCTTGAAGATCGCGACTGCCTGCTC 44238 || ||||| || || ||||| ||| || || ||||| || | || || |||| Sbjct 787 AGTGGGCTTGCCAGGCAGGTCTGTAACCTTGAGCTCTTTGAATATGGAGAGAGCATGCT- 845 Query 44239 AGCCTG-ATCCGGGAAAATCGGCGGCGGAATGATCGACT 44276 ||| | ||| | |||||| |||||||| ||||| |||| Sbjct 846 GGCCGGAATCTGTGAAAATAGGCGGCGGGATGATTGACT 884 >seq79893 Length=11432 Score = 89.7 bits (98), Expect = 1e-13 Identities = 222/332 (67%), Gaps = 4/332 (1%) Strand=Plus/Minus Query 27555 CCCCCAGTAGGCGATGCCGCGGAACAC-GCTCGCGATGTCCTGCAACACCTTGAACGCGT 27613 ||||||| ||| || || ||||| | ||| ||||| |||| || || || |||||| Sbjct 9202 CCCCCAGAAGGTAATTCCCCGGAAGATTGCT-GCGATATCCTTCAGAACGTTATACGCGT 9144 Query 27614 CG-GCCGCCGACTGGATCACGCAGTTGCAGGCGAATCGCGGCTCGACGCCGCCTTTTCCG 27672 | || | | |||||| ||| |||| || ||||| || ||||| ||| Sbjct 9143 CCTGCTGGCT-CTGGATATAAACGTTACAGGTAAAACGCGGTTCAGTACCGCCAGCGCCG 9085 Query 27673 TCCGACACCATCACATCGCAGTAGCGCGCGATTTCGTACAGCCCCCACTTGTCGATCATC 27732 | || ||| | |||||||||| ||||| || ||| |||||||||| ||||| Sbjct 9084 TTAGATACCTTTTCATCGCAGTAAGCTGCGATGGAATATAGCTCCCACTTGTCAATCATG 9025 Query 27733 GATGCATCGACGGTCTTTCCGAGCCCGTAGCGCTCGTTCAACAGCAGGTCGTAGAAGATC 27792 || |||||||| ||||| | ||| | | |||| || |||||| || || ||| Sbjct 9024 GAGGCATCGACACGGTTTCCCATTCCGAAAATTTTATTCAGCACCAGGTCATAAAAAATC 8965 Query 27793 CACGCGGGATTGTTCGTCCATGCCGGTTTGAACGTGCCGTCCCACGTGCCCGAGTACGTG 27852 || || || || || | | ||| || |||||||||||| ||| | ||| Sbjct 8964 CATGCAGGGTTATTACTGAACGCCCACACAAAATTGCCGTCCCACGCGCCGGTATACTCC 8905 Query 27853 CGCGTCTCAGGATCGTAGTTCGACGGCACACG 27884 || || | || | ||||||||||||||| || Sbjct 8904 CGGGTGACGGGGTTGTAGTTCGACGGCACCCG 8873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142567384702436