Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_008201.1 Length=34525 Score E Sequences producing significant alignments: (Bits) Value seq199410 91.5 3e-14 seq75855 80.6 6e-11 >seq199410 Length=3174 Score = 91.5 bits (100), Expect = 3e-14 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 567 CCAAAACCGCCGGTGTTATTTGGGATAATCCCCATCAGTTGTGGTGGCACACGGTGAGCA 626 ||||| ||||||| ||| || || ||||||||||||| || || || || || || || Sbjct 1614 CCAAAGCCGCCGGCGTTGTTCGGCATAATCCCCATCATCTGCGGCGGTACCCGATGCGCG 1555 Query 627 GCTAACACATCATCACGGCTCACGTTCTTGATATTAAAAAACTCATCT 674 ||| || || ||||||||||| || || ||||||| |||||||||| Sbjct 1554 CCTAGCATGTCGTCACGGCTCACATTTTTAATATTAAGAAACTCATCT 1507 >seq75855 Length=31220 Score = 80.6 bits (88), Expect = 6e-11 Identities = 85/112 (76%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 12249 AGGCGGCTACACCGGCAATGGTGGCAAATATGAGCCTGCCGGTATTGTGCATAAGGGCGA 12308 ||||||||||||||| | || ||||||| || || || |||||||||||||| || || Sbjct 8949 AGGCGGCTACACCGGGCAGGGGGGCAAATTCGACCCGGCGGGTATTGTGCATAAAGGGGA 9008 Query 12309 GTATGTAATGACCAAAGAGGCAACTGCACGCTTGGGTGTGGCAAATCTTAAC 12360 | ||| | |||||||| || |||| || | || |||| ||| ||| || Sbjct 9009 ATTTGTCTTCACCAAAGAAGCGACTGAGCGAATCGGCGTGGAAAACCTTTAC 9060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109704167884174