Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq116397 102 9e-17 seq77917 102 9e-17 seq159112 96.9 4e-15 seq284974 95.1 1e-14 seq259592 93.3 5e-14 seq120583 93.3 5e-14 seq117581 93.3 5e-14 seq104055 87.8 2e-12 seq121424 86.0 7e-12 seq259603 84.2 2e-11 seq256967 84.2 2e-11 seq95256 84.2 2e-11 seq64161 84.2 2e-11 seq22170 84.2 2e-11 >seq116397 Length=71017 Score = 102 bits (112), Expect = 9e-17 Identities = 76/88 (86%), Gaps = 2/88 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGAGC 126322 ||||||| ||||||||||||||||||||||||| | ||| |||||| | || || | || Sbjct 10963 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTTACGAGGGC 11022 Query 126323 GTGGGTTCGAACCCCACACCTGACAAAT 126350 ||||||||||||||||| ||||||||| Sbjct 11023 GTGGGTTCGAACCCCACTTCTGACAAAT 11050 >seq77917 Length=220326 Score = 102 bits (112), Expect = 9e-17 Identities = 80/95 (84%), Gaps = 2/95 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGAGC 126322 ||||||| ||||||||||||||||||||||||| | ||| |||||| | || || | || Sbjct 47131 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTTACGAGGGC 47190 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATTATT 126357 |||||||| |||||||| |||||||| || |||| Sbjct 47191 GTGGGTTCAAACCCCACTTCTGACAAAATAATATT 47225 >seq159112 Length=98435 Score = 96.9 bits (106), Expect = 4e-15 Identities = 79/95 (83%), Gaps = 2/95 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGAGC 126322 ||||||| ||||||||||||||||||||||||| | ||| |||||| | || || | || Sbjct 55975 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAGGGC 55916 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATTATT 126357 |||||||| |||||||| ||||||| || || || Sbjct 55915 GTGGGTTCAAACCCCACTTCTGACAATTTCTTTTT 55881 >seq284974 Length=55040 Score = 95.1 bits (104), Expect = 1e-14 Identities = 75/89 (84%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGAG 126321 |||||||| ||||||||||||||||||||||||| | ||| |||||| | || || | | Sbjct 31719 CAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAGGG 31778 Query 126322 CGTGGGTTCGAACCCCACACCTGACAAAT 126350 ||||||||| |||||||| |||||| || Sbjct 31779 CGTGGGTTCAAACCCCACTTCTGACATAT 31807 >seq259592 Length=65849 Score = 93.3 bits (102), Expect = 5e-14 Identities = 78/94 (83%), Gaps = 4/94 (4%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGAGCG 126323 |||||| ||||||||||||||||||||||||| | ||| |||||| | || || | ||| Sbjct 39006 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTTACGAGGGCG 38947 Query 126324 TGGGTTCGAACCCCACACCTGACAAATTATTATT 126357 ||||||| |||||||| ||||| ||| ||||| Sbjct 38946 TGGGTTCAAACCCCACTTCTGAC--ATTCTTATT 38915 >seq120583 Length=47608 Score = 93.3 bits (102), Expect = 5e-14 Identities = 79/95 (83%), Gaps = 3/95 (3%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGAGC 126322 ||||||| ||||||||||||||||||||||||| | ||| |||||| | || || | || Sbjct 33056 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTTACGAGGGC 32997 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATTATT 126357 |||||||| |||||||| ||||| | ||||| || Sbjct 32996 GTGGGTTCAAACCCCACTTCTGAC-ATTTATTTTT 32963 >seq117581 Length=142211 Score = 93.3 bits (102), Expect = 5e-14 Identities = 72/85 (85%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGAGC 126322 ||||||| ||||||||||||||||||||||||| | ||| |||||| | || || | || Sbjct 6857 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTTACGAGGGC 6916 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 |||||||| |||||||| |||||| Sbjct 6917 GTGGGTTCAAACCCCACTTCTGACA 6941 Score = 93.3 bits (102), Expect = 5e-14 Identities = 72/85 (85%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGAGC 126322 ||||||| ||||||||||||||||||||||||| | ||| |||||| | || || | || Sbjct 39797 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTTACGAGGGC 39856 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 |||||||| |||||||| |||||| Sbjct 39857 GTGGGTTCAAACCCCACTTCTGACA 39881 >seq104055 Length=154417 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/109 (79%), Gaps = 4/109 (4%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||| || | |||| Sbjct 12492 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGT 12549 Query 126325 GGGTTCGAACCCCACACCTGACAAA--TTATTATTGGAATTTTTGTTGC 126371 |||||| ||||||||| ||| || | || ||||| | |||| | ||| Sbjct 12550 GGGTTCAAACCCCACAGCTGTCATACTTTTTTATTTTATTTTTAGCTGC 12598 >seq121424 Length=96126 Score = 86.0 bits (94), Expect = 7e-12 Identities = 82/103 (80%), Gaps = 3/103 (3%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||| || | |||| Sbjct 17697 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGT 17640 Query 126325 GGGTTCGAACCCCACACCTGACA-AATTATTATTGGAATTTTT 126366 |||||| ||||||||| ||| || | || || || | ||||| Sbjct 17639 GGGTTCAAACCCCACAGCTGTCATACTTTTTGTTTTATTTTTT 17597 Score = 84.2 bits (92), Expect = 2e-11 Identities = 69/83 (83%), Gaps = 2/83 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||| || | |||| Sbjct 22358 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGT 22301 Query 126325 GGGTTCGAACCCCACACCTGACA 126347 |||||| ||||||||| ||| || Sbjct 22300 GGGTTCAAACCCCACAGCTGTCA 22278 >seq259603 Length=45352 Score = 84.2 bits (92), Expect = 2e-11 Identities = 75/93 (81%), Gaps = 2/93 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||| || | |||| Sbjct 14446 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGT 14389 Query 126325 GGGTTCGAACCCCACACCTGACAAATTATTATT 126357 |||||| || |||||| ||| |||| | || || Sbjct 14388 GGGTTCAAATCCCACAGCTGTCAAACTTTTTTT 14356 >seq256967 Length=61658 Score = 84.2 bits (92), Expect = 2e-11 Identities = 73/90 (81%), Gaps = 2/90 (2%) Strand=Plus/Plus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 10003 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 10060 Query 126328 TTCGAACCCCACACCTGACAAATTATTATT 126357 ||| || |||||| ||| || ||| || || Sbjct 10061 TTCAAATCCCACAGCTGTCATATTTTTCTT 10090 >seq95256 Length=243644 Score = 84.2 bits (92), Expect = 2e-11 Identities = 73/90 (81%), Gaps = 2/90 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||| || | |||| Sbjct 35304 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGT 35247 Query 126325 GGGTTCGAACCCCACACCTGACAAATTATT 126354 |||||| || |||||| ||| || ||| || Sbjct 35246 GGGTTCAAATCCCACAGCTGTCATATTTTT 35217 >seq64161 Length=79141 Score = 84.2 bits (92), Expect = 2e-11 Identities = 73/90 (81%), Gaps = 2/90 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||| || | |||| Sbjct 27877 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGT 27934 Query 126325 GGGTTCGAACCCCACACCTGACAAATTATT 126354 |||||| || |||||| ||| || ||| || Sbjct 27935 GGGTTCAAATCCCACAGCTGTCATATTTTT 27964 >seq22170 Length=109479 Score = 84.2 bits (92), Expect = 2e-11 Identities = 73/90 (81%), Gaps = 2/90 (2%) Strand=Plus/Plus Query 126262 TACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAG 126321 || || ||| |||||||||||||||||||||||||||||| | |||||| || | | Sbjct 58428 TAAAGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGG 58485 Query 126322 CGTGGGTTCGAACCCCACACCTGACAAATT 126351 ||||||||| || |||||| ||| ||| || Sbjct 58486 CGTGGGTTCAAATCCCACAGCTGTCAATTT 58515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553385842432040