Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_008689.1 Length=44857 Score E Sequences producing significant alignments: (Bits) Value seq496987 93.3 1e-14 >seq496987 Length=1575 Score = 93.3 bits (102), Expect = 1e-14 Identities = 118/160 (74%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 40996 AAATATGAAGAACAAAAATCGATTCTTA-AAGATAGAAATAGCTTTTCTAAAACTGATCA 41054 |||||| || ||||| | || |||| ||| ||||| | ||| ||||| ||||| Sbjct 822 AAATATAAAAAACAACAGGAAAT-CTTAGAAGCCAGAAACTCGTATTCCAAAACGGATCA 880 Query 41055 TGATGCAACTTTTATGAGAATGAAGGAAGACCATATGAAAAATGGCCAACTTAAGCCAGG 41114 ||| || ||||||||| | ||||||||||| ||||||| ||| || || || || || | Sbjct 881 TGACGCCACTTTTATGCGGATGAAGGAAGATCATATGAGAAACGGACAGCTCAAACCCGC 940 Query 41115 ATACAATTTACAAATAGCGACAAATTCTCAATTTGTTTTA 41154 || ||| |||| || | |||||| |||||| ||||| Sbjct 941 TTATAATCTACAGATTTCTACAAATAAACAATTTATTTTA 980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142570565732038