Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_009447.1 Length=52414 Score E Sequences producing significant alignments: (Bits) Value seq201909 118 4e-22 >seq201909 Length=21394 Score = 118 bits (130), Expect = 4e-22 Identities = 251/370 (68%), Gaps = 16/370 (4%) Strand=Plus/Minus Query 1253 CTGTATGAAGGCACTCGCGGCCCCGGCAAGACGGATGCGCAATTGATGAAGTTCCGGCGC 1312 |||| ||| || |||||||| ||||| ||||| | || || | |||||||| Sbjct 2133 CTGTTTGAGGGAACTCGCGGGCCCGGAAAGACAGCGGCACAGCTTGCCCGCTTCCGGCGA 2074 Query 1313 TATGTCGGCCTCGGCTATGGCCGGTTCTGGCGCGGGATCATTTTCGACCGTGAATACAAA 1372 || || | || || ||| |||||||||||| ||||| |||||| |||||||||| Sbjct 2073 CTGGTAGGGTTAGGTTACGGCACGTTCTGGCGCGGCATCATATTCGACACTGAATACAAA 2014 Query 1373 AATCTCGATGACTTGGTATCCAAGAGCCAGCGTTGGTTTCCGCTATTCGAGGATGGCGCG 1432 || |||| || | | | || ||||| || || ||| |||| |||||||| Sbjct 2013 AACCTCGCAGATATCATCACTCAGTCAAAGCGTATGTATCGGCTTTTCGGTGATGGCGCC 1954 Query 1433 AAGTTC---AA---GGCATC-GAAGTCCGATTATCGCTGGGTCTGGCCTACCGGCGAAGA 1485 | ||| || ||||| ||| | ||| ||||| |||||||| || || || Sbjct 1953 AGATTCCTTAACTCAGCATCTGAACTGCGA-------TGGGTATGGCCTACGGGTGAGGA 1901 Query 1486 ACTCCTGTTCCG-TCAGATCAAGAAGTCGACCGACTACTGGAACTATCACGGTCAGGAAT 1544 || || ||||| | | | |||| | || |||||| ||| | || || || ||||||| Sbjct 1900 GCTGCTTTTCCGCTTCGGTAAAGAGGCTGA-CGACTATTGGGATTACCATGGCCAGGAAT 1842 Query 1545 TCCCGTTCATTGGCTGGAACGAATTGTCGAAATACCCGACGCCCGACCTCTATGAGTCGA 1604 |||||||||| |||| ||||| || | ||| | || | | ||| | || || |||| Sbjct 1841 TCCCGTTCATCGGCTTTAACGAGCTGACCAAACAGCCTAATGCTGACTTTTACGAATCGA 1782 Query 1605 TGATGTCGTG 1614 || | || || Sbjct 1781 TGTTCTCTTG 1772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166609606434352