Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_009540.1 Length=49902 Score E Sequences producing significant alignments: (Bits) Value seq79893 114 4e-21 seq75855 93.3 1e-14 >seq79893 Length=11432 Score = 114 bits (126), Expect = 4e-21 Identities = 110/141 (78%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 22019 GGGCGGTTATACTGGCGACGGTGGCAAATATGATCCGGCTGGCGTTGTTCATAAGGGTGA 22078 ||| || |||||||| |||||||| || ||||| || ||||| || ||| ||||| Sbjct 5057 GGGTGGATATACTGGAGACGGTGGGAAGTATGAGCCCAAAGGCGTGGTGCATGGCGGTGA 5116 Query 22079 GTTTGTTTTCACCAAAGAGGCAACGCAAAGAATCGGAGCTAAAAACCTGTATCGCATGAT 22138 ||||||||||||||||||||| || || | ||||| | |||||||| || ||||||| Sbjct 5117 GTTTGTTTTCACCAAAGAGGCGACCCAGCGTATCGGCGTCAAAAACCTTTACGGCATGAT 5176 Query 22139 GCGAGGTTATGCAAACGGCGG 22159 ||| ||||| || | ||||| Sbjct 5177 GCGGGGTTACGCTGATGGCGG 5197 >seq75855 Length=31220 Score = 93.3 bits (102), Expect = 1e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 22008 GGTTTTGCTGGGGGCGGTTATACTGGCGACGGTGGCAAATATGATCCGGCTGGCGTTGTT 22067 || || | ||| ||||| || || || | || ||||||| || ||||| || |||| Sbjct 8938 GGATTCGATGGAGGCGGCTACACCGGGCAGGGGGGCAAATTCGACCCGGCGGGTATTGTG 8997 Query 22068 CATAAGGGTGAGTTTGTTTTCACCAAAGAGGCAACGCAAAGAATCGGAGCTAAAAACCTG 22127 ||||| || || ||||| ||||||||||| || || | ||||||| | ||||||| Sbjct 8998 CATAAAGGGGAATTTGTCTTCACCAAAGAAGCGACTGAGCGAATCGGCGTGGAAAACCTT 9057 Query 22128 TATCGCATGATGCGAGGTTATGCAAACGGCGGTCAAGTAGG 22168 || ||||||||| || ||||| | ||| || | ||||| Sbjct 9058 TACGACATGATGCGCGGCTATGCCAGCGGTGGCCTCGTAGG 9098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 158618860074128