Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_010106.1 Length=52975 Score E Sequences producing significant alignments: (Bits) Value seq260686 484 2e-132 seq1462 435 1e-117 seq15764 428 2e-115 >seq260686 Length=13603 Score = 484 bits (536), Expect = 2e-132 Identities = 766/1097 (70%), Gaps = 12/1097 (1%) Strand=Plus/Plus Query 51857 ATGGCTTACACTACCTTTTCACAAACCAAGAATAACCAATTACTAGAGCCAATGTTCTTT 51916 ||||||||||| || ||||| || | || ||||||||| | |||| || |||||||| Sbjct 6943 ATGGCTTACACCACATTTTCGCAGAATAAAAATAACCAACTGTTAGAACCGATGTTCTTC 7002 Query 51917 GGTCAGAACGTTAACGTTGCTCGATATGACCAACAGAAGTACGGCATATTCGAGAAGTTA 51976 || ||| || ||||| || || | ||||| ||||| || | ||| || || ||| | Sbjct 7003 GGACAGCCGGTAAACGTGGCGCGTTTCGACCAGCAGAAATATGACATCTTTGAAAAGCTG 7062 Query 51977 ATTGAGAAACAATTGTCATTCTTCTGGCGACCGGAAGAGGTAGACGTTTCCCAGGACCGT 52036 || || || || | || ||||||||||| |||||||| || ||||| || | || ||| Sbjct 7063 ATCGAAAAGCAGCTCTCTTTCTTCTGGCGCCCGGAAGAAGTGGACGTCTCGCGCGATCGT 7122 Query 52037 ATTGATTATCAGAAGCTACCTGCAAACGAACAACACATTTTCACCAGTAATCTTCGTTAT 52096 ||||| |||||| ||| || | ||||| ||||||| || | ||| || || ||| Sbjct 7123 ATTGACTATCAGGCGCTGCCAGAGCACGAAAAACACATCTTTATCAGCAACCTGAAGTAT 7182 Query 52097 CAGATTCTTCTTGACTCAATTCAGGGACGTGGGCCCAACACAGTTTTGCTTCCAATCGTG 52156 |||| ||| || ||||| ||||||||||| | || ||| | ||||| || | | Sbjct 7183 CAGACTCTGCTGGACTCTATTCAGGGACGCAGCCCGAACGTGGCGTTGCTGCCGCTGATC 7242 Query 52157 AGCATTCCTGAATTGGAGACGTGGATTGAAACCTGGTCTTTCTCCGAGACTATTCATTCA 52216 || || ||| |||| || ||||||||||||||| | |||||||||||||| || || Sbjct 7243 TCGATCCCGGAACTGGAAACCTGGATTGAAACCTGGGCGTTCTCCGAGACTATCCACTCG 7302 Query 52217 CGTTCTTATACCCACATCATTCGTAATATTGTTACAGACCCAAGCATTATCTTTGATGAA 52276 ||||| || ||||| || ||||||||||| |||| ||||| | ||||||| || Sbjct 7303 CGTTCGTACACCCATATTATTCGTAATATCGTTAACGACCCGGCGCTGGTCTTTGACGAT 7362 Query 52277 ATCGTAACTAACGAACACATCAAGGCACGAGCAATTGGCATCTCCCAATATTATGACGAA 52336 ||||| || ||||| || ||| | |||| || | | ||||| || || ||||| Sbjct 7363 ATCGTCACCAACGAGCAGATCCTGTCACGCGCCAAAGATATCTCTGGCTACTACGACGAT 7422 Query 52337 CTCCAGCAACTCACTGCATTATGGCAGTTGTTCGGAGAAGGGAGCCA-----TGCTGGTC 52391 || || | || | ||||| || | || ||||| | || || || | Sbjct 7423 CTGATCGAAATGACCAACTACTGGCATCTGCTGGGTGAAGGCACGCACCAGGTGGCGGGC 7482 Query 52392 A------TGA-AATTAGTCTGCGTGAGTTGAAGAAGAAGCTGTATTTATGCCTCATGTCT 52444 | ||| | || ||||| | | |||| ||| |||| ||| | ||||| ||| Sbjct 7483 AAAACCGTGACCGTCAGCCTGCGCGCGCTGAAAAAGCAGCTCTATATCTGCCTGATGAGC 7542 Query 52445 ATCAATGCATTGGAAGCAATTCGCTTCTATGTCAGCTTTGCTTGCTCATTTGCCTTCGCA 52504 |||| || ||||||| || ||||| || |||||||| || ||||| || ||||| || Sbjct 7543 GTCAACGCGCTGGAAGCGATCCGCTTTTACGTCAGCTTCGCCTGCTCTTTCGCCTTTGCC 7602 Query 52505 GAACGTAAGTTAATGGAAGGAAATGCCAAGATTATTCGCTTAATTGCACGAGATGAAGCA 52564 || || | | |||||||| |||||||| || ||| | || || || |||||||| Sbjct 7603 GAGCGCGAACTGATGGAAGGCAATGCCAAAATCATTAAGCTGATCGCCCGCGATGAAGCT 7662 Query 52565 CTTCATTTGACAGGAACTCAGCACATGCTGAACCTTCTTGCAAGTGGAAAAGATGACCCA 52624 || || |||| || |||||||| ||||||||||| || ||||| |||| || || Sbjct 7663 CTGCACCTGACCGGCACTCAGCATATGCTGAACCTGCTGCGCAGTGGGGAAGACGATCCG 7722 Query 52625 GAAATGGGTGAAATTGCTGCTGAATGCCGCCAAGAATGCCAGAAATTGTTCGAAGATGCT 52684 ||||||| || |||||| || ||||| ||||| ||| | | |||||| ||| Sbjct 7723 GAAATGGCCGAGATTGCTAAAGAGTGCCGTCAAGAGTGCTACGATCTGTTCGTGCTGGCT 7782 Query 52685 GCTCAACAAGAGAAGGATTGGGCCGATTATTTGTTCAAAGATGGCTCTATGATTGGCTTA 52744 || | || ||||| || ||||| || ||| |||||| | || || ||||||||| | Sbjct 7783 GCCGAGCAGGAGAAAGAGTGGGCGGAATATCTGTTCAGCGGCGGTTCAATGATTGGCCTG 7842 Query 52745 AACAAGCAAATTCTATGCGGATATGTGGAATATATCACGAATATTCGTATGCAAGCAGTT 52804 || || | ||||| || || | || || ||||| || || |||||| | || ||| Sbjct 7843 AATAAAGATATTCTGTGGCAGTACATTGAGTACATCACCAACATCCGTATGAACGCTGTT 7902 Query 52805 GGATTAGATGCTCCATTCAAAGGTGCAACTAACCCGATTCCGTGGATTAATGCATGGTTG 52864 || | ||| || || ||| | |||||||| |||||||| || | ||| || Sbjct 7903 GGTCTGGATCTGCCGTTTAAAACCCGCTCGAACCCGATCCCGTGGATCAACTCGTGGCTG 7962 Query 52865 AATTCGGATGCTGTACAGGTTGCTCCACAGGAAACGGAGATTAGTTCCTACCTGGTCGGG 52924 || ||| || ||||||||||| |||||| ||| | || || ||||||||||| Sbjct 7963 GTGTCCGATAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGCTCTTACCTGGTCGGA 8022 Query 52925 CAAATTGACTCCGAAGT 52941 || || ||||| ||||| Sbjct 8023 CAGATCGACTCTGAAGT 8039 >seq1462 Length=4781 Score = 435 bits (482), Expect = 1e-117 Identities = 753/1091 (69%), Gaps = 16/1091 (1%) Strand=Plus/Plus Query 51856 AATGGCTTACACTACCTTTTCACAAACCAAGAATAACCAATTACTAGAGCCAATGTTCTT 51915 |||||||||||| || |||||||||| || || | || | ||||||||||||||| Sbjct 2785 AATGGCTTACACCACTTTTTCACAAAATAAAAACGATCAGCTCAAAGAGCCAATGTTCTT 2844 Query 51916 TGGTCAGAACGTTAACGTTGCTCGATATGACCAACAGAAGTACGGCATATTCGAGAAGTT 51975 ||| || || |||||||| || ||||||||||| || || | || || || || | Sbjct 2845 TGGCCAACCGGTCAACGTTGCGCGCTATGACCAACAAAAATATGAAATTTTTGAAAAACT 2904 Query 51976 AATTGAGAAACAATTGTCATTCTTCTGGCGACCGGAAGAGGTAGACGTTTCCCAGGACCG 52035 ||||| || ||| | || ||||| ||||| || ||||| || || || || | || || Sbjct 2905 GATTGAAAAGCAACTCTCCTTCTTTTGGCGCCCTGAAGAAGTCGATGTCTCACGCGATCG 2964 Query 52036 TATTGATTATCAGAAGCTACCTGCAAACGAACAACACATTTTCACCAGTAATCTTCGTTA 52095 || |||| ||| || || |||| | |||||| || || || ||||| | || Sbjct 2965 GATCGATTTTCAAAAACTTCCTGAACACGAACGTCATATCTTTTTAAGTAACTTAAAATA 3024 Query 52096 TCAGATTCTTCTTGACTCAATTCAGGGACGTGGGCCCAACACAGTTTTGCTTCCAATCGT 52155 ||| | || | || || || || || || | || ||| | || | || | | Sbjct 3025 TCAAACGCTATTGGATTCTATCCAAGGGCGCAGTCCGAACGTTGCGCTGTTACCGCTAAT 3084 Query 52156 GAGCATTCCTGAATTGGAGACGTGGATTGAAACCTGGTCTTTCTCCGAGACTATTCATTC 52215 |||||||||| |||| || ||| ||||||||||| | |||||||| || || || || Sbjct 3085 CTCCATTCCTGAACTGGAAACATGGGTTGAAACCTGGGCGTTCTCCGAAACGATCCACTC 3144 Query 52216 ACGTTCTTATACCCACATCATTCGTAATATTGTTACAGACCCAAGCATTA-TCTTTGATG 52274 ||||||||| || || || ||||||||||| || | ||||| || || | || || | Sbjct 3145 ACGTTCTTACACTCATATTATTCGTAATATCGTGAACGACCCG-GCTCTAGTATTCGACG 3203 Query 52275 AAATCGTAACTAACGAACACATCAAGGCACGAGCAATTGGCATCTCCCAATATTATGACG 52334 | ||||| || || || || ||| | || || | || || | || ||||||| Sbjct 3204 ATATCGTGACGAATGACCAGATCCTGCGCCGTGCTGAAGATATTTCTAAGTACTATGACG 3263 Query 52335 AACTCCAGCAACTCACTGCATTATGGCAGTTGTTCGGAGAAGGGAGCCATGCTGGT--CA 52392 | || || | || | ||||| | || || ||||| |||| | ||| || Sbjct 3264 ACCTGATCGAAATGACCAACTACTGGCATCTTTTAGGTGAAGGTGACCAT-CAGGTTGCA 3322 Query 52393 TGAAA-----------TTAGTCTGCGTGAGTTGAAGAAGAAGCTGTATTTATGCCTCATG 52441 |||| || ||||| | || ||||| |||| || | ||||| ||| Sbjct 3323 GGAAAAACCGTGACCGTTTCCCTGCGCGGATTAAAGAAACAGCTTTACCTCTGCCTGATG 3382 Query 52442 TCTATCAATGCATTGGAAGCAATTCGCTTCTATGTCAGCTTTGCTTGCTCATTTGCCTTC 52501 ||||||| | ||||| ||||| ||||| || ||||||||||| ||||| || ||| Sbjct 3383 AGCGTCAATGCCCTCGAAGCCATTCGTTTCTACGTGAGCTTTGCTTGTTCATTCGCGTTC 3442 Query 52502 GCAGAACGTAAGTTAATGGAAGGAAATGCCAAGATTATTCGCTTAATTGCACGAGATGAA 52561 || || ||| || | |||||||| ||||||||||| || || | || ||||| || ||| Sbjct 3443 GCCGAGCGTGAGCTGATGGAAGGTAATGCCAAGATCATCCGTCTTATCGCACGGGACGAA 3502 Query 52562 GCACTTCATTTGACAGGAACTCAGCACATGCTGAACCTTCTTGCAAGTGGAAAAGATGAC 52621 || || || |||| ||||| ||||| ||||| || || || ||| || ||||||| Sbjct 3503 GCCCTGCACCTGACGGGAACACAGCATATGCTAAATCTGCTGCGAAGCGGTGAAGATGAT 3562 Query 52622 CCAGAAATGGGTGAAATTGCTGCTGAATGCCGCCAAGAATGCCAGAAATTGTTCGAAGAT 52681 || |||||| || ||||||||||| ||| ||||| ||| | | ||| || | Sbjct 3563 CCGGAAATGAAAGAGATTGCTGCTGAGTGCGAGCAAGAGTGCTTTGAGCTATTCAAAAAG 3622 Query 52682 GCTGCTCAACAAGAGAAGGATTGGGCCGATTATTTGTTCAAAGATGGCTCTATGATTGGC 52741 |||||| | || || || || ||||| || || ||||| |||||||| ||||| || Sbjct 3623 GCTGCTGAGCAGGAAAAAGAGTGGGCAGAATACCTGTTCCGTGATGGCTCGATGATCGGA 3682 Query 52742 TTAAACAAGCAAATTCTATGCGGATATGTGGAATATATCACGAATATTCGTATGCAAGCA 52801 | || || | ||||| ||| ||| | |||||||| || |||||||||||||| || Sbjct 3683 ATGAATAAAGATATTCTCTGCCAATACATCGAATATATTACCAATATTCGTATGCATGCC 3742 Query 52802 GTTGGATTAGATGCTCCATTCAAAGGTGCAACTAACCCGATTCCGTGGATTAATGCATGG 52861 || ||| | || ||||||||| | ||||||| ||||| ||||||||| | ||| Sbjct 3743 GTGGGACTGGAACTACCATTCAAAACTCGCTCTAACCCAATTCCTTGGATTAATTCGTGG 3802 Query 52862 TTGAATTCGGATGCTGTACAGGTTGCTCCACAGGAAACGGAGATTAGTTCCTACCTGGTC 52921 || || ||| || || || ||||| || ||| ||| | || || ||||| ||| Sbjct 3803 TTAGTCTCCGATAACGTGCAAGTGGCTCCGCAAGAAGTGGAAGTCAGCTCTTACCTTGTC 3862 Query 52922 GGGCAAATTGA 52932 || ||||| || Sbjct 3863 GGCCAAATCGA 3873 >seq15764 Length=1899 Score = 428 bits (474), Expect = 2e-115 Identities = 767/1114 (69%), Gaps = 21/1114 (2%) Strand=Plus/Plus Query 51846 GGAAATCTGTAATGGCTTACACTACCTTTTCACAA---ACCAAGAATAACCAATTACTAG 51902 ||| | || | ||||||||| | || || ||||| | ||| ||| | || | || Sbjct 533 GGACAACTTTTATGGCTTACTCCACTTTCTCACAGCACAACAAAAATGATCAGCTGAAAG 592 Query 51903 AGCCAATGTTCTTTGGTCAGAACGTTAACGTTGCTCGATATGACCAACAGAAGTACGGCA 51962 |||| ||||| || |||||| ||| ||||| || || | | ||| || || || | || Sbjct 593 AGCCGATGTTTTTCGGTCAGTCCGTAAACGTGGCGCGCTTCGCCCAGCAAAAATATGACA 652 Query 51963 TATTCGAGAAGTTAATTGAGAAACAATTGTCATTCTTCTGGCGACCGGAAGAGGTAGACG 52022 | || || ||| | || || || || | || ||||||||||| ||||||||||| |||| Sbjct 653 TCTTTGAAAAGCTGATCGAAAAGCAGCTCTCCTTCTTCTGGCGTCCGGAAGAGGTCGACG 712 Query 52023 TTTCCCAGGACCGTATTGATTATCAGAAGCTACCTGCAAACGAACAACACATTTTCACCA 52082 |||| | || || || ||||| ||| ||| || | ||||| |||| ||||| | || Sbjct 713 TTTCACGCGATCGCATCGATTACCAGGCGCTGCCGGACCACGAAAAACATATTTTTATCA 772 Query 52083 GTAATCTTCGTTATCAGATTCTTCTTGACTCAATTCAGGGACGTGGGCCCAACACAGTTT 52142 | || || ||||||| || || || || |||||||| || | || ||| | Sbjct 773 GCAACCTGAAATATCAGACGCTGCTGGATTCTATTCAGGGCCGCAGCCCGAACGTCGCGC 832 Query 52143 TGCTTCCAATCGTGAGCATTCCTGAATTGGAGACGTGGATTGAAACCTGGTCTTTCTCCG 52202 |||| || | | ||||||||| |||| || ||||||||||||||| | ||||| | Sbjct 833 TGCTGCCGCTGATCTCGATTCCTGAACTGGAAACCTGGATTGAAACCTGGGCGTTCTCAG 892 Query 52203 AGACTATTCATTCACGTTCTTATACCCACATCATTCGTAATATTGTTACAGACCCAAGCA 52262 |||| ||||| || |||||||| ||||||||||| |||||||| |||| || || ||| Sbjct 893 AGACGATTCACTCCCGTTCTTACACCCACATCATCCGTAATATCGTTAACGATCCG-GCA 951 Query 52263 TTA-TCTTTGATGAAATCGTAACTAACGAACACATCAAGGCACGAGCAATTGGCATCTCC 52321 | | ||||| || ||||| || || || || || ||| || || | ||||| Sbjct 952 GTGGTGTTTGACGATATCGTCACCAATGAGCAGATTCTGGCGCGTGCTCAGGATATCTCA 1011 Query 52322 CAATATTATGACGAACTCCAGCAACTCACTGCATTATGGCAGTTGTTCGGAGAAGGGAGC 52381 | ||||| ||||| || | | || | ||||| | | || ||||| | Sbjct 1012 CGCTATTACGACGATCTGATTGAGATGACCAACTACTGGCATCAGCTGGGTGAAGGCACG 1071 Query 52382 CATGCTGGTCATG---AAA----------TTAGTCTGCGTGAGTTGAAGAAGAAGCTGTA 52428 ||| | ||||| ||| | || ||||| | |||||||| |||| || Sbjct 1072 CAT-CAGGTCAACGGCAAACCGGTTGTCGTCAGCCTGCGCGCCCTGAAGAAGCAGCTCTA 1130 Query 52429 TTTATGCCTCATGTCTATCAATGCATTGGAAGCAATTCGCTTCTATGTCAGCTTTGCTTG 52488 | | ||||| ||| ||||||| ||||||| || || |||||||||||||| || || Sbjct 1131 TATCTGCCTGATGAGCGTCAATGCGCTGGAAGCGATCCGTTTCTATGTCAGCTTCGCCTG 1190 Query 52489 CTCATTTGCCTTCGCAGAACGTAAGTTAATGGAAGGAAATGCCAAGATTATTCGCTTAAT 52548 ||||| || ||||| || ||| || | |||||||| |||||||| || || | || Sbjct 1191 TTCATTCGCGTTCGCTGAGCGTGAGCTGATGGAAGGCAATGCCAAAATCATCAAGCTGAT 1250 Query 52549 TGCACGAGATGAAGCACTTCATTTGACAGGAACTCAGCACATGCTGAACCTTCTTGCAAG 52608 ||| || |||||||| || || |||| || || |||||||||||||| || || || Sbjct 1251 TGCCCGCGATGAAGCGCTGCACCTGACCGGCACCCAGCACATGCTGAATCTGCTGCGCAG 1310 Query 52609 TGGAAAAGATGACCCAGAAATGGGTGAAATTGCTGCTGAATGCCGCCAAGAATGCCAGAA 52668 || |||| || || || ||| || ||||| || || ||||| |||| ||| | Sbjct 1311 CGGTGAAGACGATCCGGAGATGAAAGAGATTGCGGCAGAGTGCCGTGAAGAGTGCTTCGA 1370 Query 52669 ATTGTTCGAAGATGCTGCTCAACAAGAGAAGGATTGGGCCGATTATTTGTTCAAAGATGG 52728 |||| | | || || | || ||||| || ||||| || ||| |||||| | || Sbjct 1371 GCTGTTTAAGAAAGCAGCGCTGCAGGAGAAAGAGTGGGCAGAATATCTGTTCAGCGGCGG 1430 Query 52729 CTCTATGATTGGCTTAAACAAGCAAATTCTATGCGGATATGTGGAATATATCACGAATAT 52788 ||| ||||| ||| | ||||| | ||||| ||| || | || || ||||| ||||| Sbjct 1431 CTCAATGATCGGCCTGAACAAAGATATTCTCTGCCAGTACATTGAGTACATCACCAATAT 1490 Query 52789 TCGTATGCAAGCAGTTGGATTAGATGCTCCATT-CAAAGGTGCAACTAACCCGATTCCGT 52847 |||||||| || ||||| | ||| || || || | | || | ||||| || || | Sbjct 1491 CCGTATGCAGGCTGTTGGCCTTGATTTGCCGTTCCAGACGCGC-TCAAACCCAATCCCAT 1549 Query 52848 GGATTAATGCATGGTTGAATTCGGATGCTGTACAGGTTGCTCCACAGGAAACGGAGATTA 52907 ||||||| | ||| || || || || |||||||| || |||||| ||| | | Sbjct 1550 GGATTAACTCCTGGCTGGTCTCTGACAACGTTCAGGTTGCGCCGCAGGAAGTGGAAGTGA 1609 Query 52908 GTTCCTACCTGGTCGGGCAAATTGACTCCGAAGT 52941 | ||||| ||||| || || || || || ||||| Sbjct 1610 GCTCCTATCTGGTGGGTCAGATCGATTCTGAAGT 1643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 168394164041074