Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_011041.1 Length=137947 Score E Sequences producing significant alignments: (Bits) Value seq185146 293 2e-74 >seq185146 Length=13167 Score = 293 bits (324), Expect = 2e-74 Identities = 270/341 (79%), Gaps = 3/341 (1%) Strand=Plus/Minus Query 134625 CCATCATCACTTAGAAGATTACGAATTATTTCTAACCTATCCCTCATTAAGCCCAGCCAA 134684 ||||| ||||| || | ||||||||| || || || | ||| | ||| | | |||| Sbjct 8430 CCATCTTCACTGAGTAAATTACGAATAATCTCCAAGCGATCACGCATCAGAGTTAACCAA 8371 Query 134685 ACGGAATGCTCCAGGCTATCATCGTAGTGCTCAAAAGCCCTCCCGGTATTGAATGGTGGG 134744 | || ||||| | | ||| ||||| |||||||| || || || || || | ||||| Sbjct 8370 AGTGAGTGCTCAACCCCATCGTCGTAATGCTCAAAGGCACTGCCCGTGTTATAGGGTGGA 8311 Query 134745 TCTATGTAAACACACTTCACTTTGCCTGCATACTCTTGCTCTAGCGCCTTCAATGCTAAT 134804 || || ||||||||||||||||||||||||| || |||||||| ||||||| || || Sbjct 8310 TCGATAAAAACACACTTCACTTTGCCTGCATATTCCTGCTCTAGTGCCTTCAGCGCCAAC 8251 Query 134805 AAGTTATCTCCAAAAATCAGTTTATTATCAAAAATATCGTTTTCGGTCACTTTCTGGCT- 134863 | ||| || |||||||| || ||||||||||||||||| |||||||| ||||| ||||| Sbjct 8250 AGGTTGTCGCCAAAAATAAGCTTATTATCAAAAATATCTTTTTCGGTGACTTTTTGGCTA 8191 Query 134864 --GTGGTAAGACTTGCTAGAATCTTCTAACAAAATGTGCTGCTCTAACTTTTTGCGCTCG 134921 |||||||||| |||| |||||| || |||||| || |||| | |||||||||||| Sbjct 8190 GCAAGGTAAGACTTACTAGGATCTTCCAATAAAATGCGCGGCTCAAGTTTTTTGCGCTCG 8131 Query 134922 TTTTTACCTATCCAGGTAAGTTCTAATTTGGTTTTACTCAT 134962 |||||||||||||| || ||||||||||||||||| ||||| Sbjct 8130 TTTTTACCTATCCAAGTCAGTTCTAATTTGGTTTTGCTCAT 8090 Score = 140 bits (154), Expect = 3e-28 Identities = 196/273 (72%), Gaps = 13/273 (5%) Strand=Plus/Minus Query 133628 TTGTACTCTTTATTGATCA----------GAA-TTATCTTTCGTAATTAAGGTCTGGGTA 133676 ||||||||||| ||||||| ||| || ||||| ||||| | | | | | Sbjct 9345 TTGTACTCTTTGTTGATCACTTCCAAGCCGAACTTGTCTTTAACGATTAAAGACGGTGCA 9286 Query 133677 AGTTTGTAATAGCGGAAGCCACCGCCACCTTGCCAGCTTGCAGACTTAGAAATACCACCT 133736 ||||||||||| ||||| |||||||||||||||||| | ||| ||||| | ||| ||| Sbjct 9285 AGTTTGTAATAACGGAAACCACCGCCACCTTGCCAGTTAACAGTTTTAGATACACCGCCT 9226 Query 133737 TGATCTTCACCATCAATCACTTTTTGCAAGCGAGGGATAATATGGGTATGACAATG-ATC 133795 ||||||||||||||||| |||||||| || || || | | | | |||||| ||| Sbjct 9225 TGATCTTCACCATCAATGACTTTTTGTAACCGGGGTAACACTACATTGTCACAATGCATC 9166 Query 133796 ACCCAGTTCGATCAAGATCCAACGTCTTTTCATCTTGTGGGCTACAGCAGCAGTAGTTCC 133855 || || || | || ||||| || | |||||| || ||||| ||| | ||||| || Sbjct 9165 -CCTAGCTCAACCATAATCCAGCGGCGCCCCATCTTATGAGCTACCGCACCTGTAGTGCC 9107 Query 133856 CGAACCGCCGAATGAATCCAATACCAAATCACC 133888 ||||| | || ||||| || || | ||||| Sbjct 9106 AGAACCAGCAAAAGAATCTAAAACAATGTCACC 9074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 438548557182120