Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq228004 122 4e-23 seq32733 104 1e-17 seq430283 95.1 6e-15 >seq228004 Length=3045 Score = 122 bits (134), Expect = 4e-23 Identities = 457/707 (65%), Gaps = 16/707 (2%) Strand=Plus/Plus Query 65903 TGTGGACACCATTCCCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCG--GGGGG 65960 |||||| || || | ||||||||| | | | ||| ||| | || || || || Sbjct 244 TGTGGAAACTATCTCTACCGGCTCGCTGTCGCCGGATATCGCCTTAGGAGGCGCAGGCGG 303 Query 65961 TAT-CCGAGGGGCCGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTT 66019 | | || | |||||| | || ||||||||||| |||||||||||||| || | ||| | Sbjct 304 TCTGCCAATGGGCCGTATCGTTGAGATCTACGGACCTGAGTCTTCAGGTAAAACCACGCT 363 Query 66020 GTGCCTCCACGCGGTGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGC 66079 | || || | | || ||| ||| ||| | | |||| ||||| || Sbjct 364 GACTCTGCAGGTTATCGCATCTGCACAGCGTAAAGGTAAAACCTGTGCCTTTATCGATGC 423 Query 66080 CGAACATTCTCTCGACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGT 66139 ||| ||| | || || || | |||||| | ||||| || || | || || || | Sbjct 424 CGAGCATGCGCTTGATCCGGTTTACGCCAAGAAACTCGGCGTAGACATTGATAACCTGCT 483 Query 66140 G-GTTGTGCAGCCAGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGT 66198 | | | |||||||||||||| |||||||| ||||| ||| ||| || | | Sbjct 484 CTGCTCT-CAGCCAGACACTGGTGAGCAGGCGCTGGAAATCTGTGATGCGCTGGCGCGCT 542 Query 66199 CTGGCGAGGTTTCCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGC 66258 |||| | ||| | | ||| | || ||||| || ||||| ||| ||| ||||| Sbjct 543 CTGGTGCCGTTGACGTGATCATCGTCGACTCCGTCGCGGCGCTGACGCCTAAAGCGGAAA 602 Query 66259 TCGAAGGGGACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCA 66318 ||||||| || ||||| ||||| ||| | ||||| || || ||||| ||||| | Sbjct 603 TCGAAGGTGAAATCGGTGACTCACACATGGGCCTCGCGGCACGTATGATGAGCCAGGCGA 662 Query 66319 TGCGCAAGCTGACCGGCACGATTGCCAGCA--CCAACACGCTCACCCTGTGGGTGAATCA 66376 |||| || ||| |||| | | |||| |||| || || | | | || || Sbjct 663 TGCGTAAACTGGCCGGTA--ACCTGAAGCAGTCCAATACCCTGCTGATTTTCATCAACCA 720 Query 66377 GCTGCGCGAGAAGATCG--GCAACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGT 66434 | | || ||| || | | | || | || |||| || |||||||| |||||| Sbjct 721 GATCCGTATGAAAATTGGTGTGATGTTTGGTA--ACCCG---GAAACCACCACTGGTGGT 775 Query 66435 AAGGCTCTGCGCTTCTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAG 66494 || || ||| ||||||||||| || ||| | ||| ||||| | |||| | || Sbjct 776 AACGCGCTGAAGTTCTACGCCTCTGTCCGTCTTGATATCCGCCGTATCGGTGCAATCAAA 835 Query 66495 GAAGGCGATGAGGCTGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCG 66554 || |||||| | | ||||||| || ||||| || || || || ||||| | || Sbjct 836 GAGGGCGATAACGTGGTCGGCAGTGAGACCCGCGTTAAAGTGGTGAAAAACAAAATCGCC 895 Query 66555 CCTCCGCACCGCCAGGCTGAGTTTTCCATCGTCTACGGCGAGGGCAT 66601 | || | ||||||||||| ||| | |||||||| || || Sbjct 896 GCGCCATTCAAACAGGCTGAGTTCCAGATCATGTACGGCGAAGGTAT 942 >seq32733 Length=979 Score = 104 bits (114), Expect = 1e-17 Identities = 188/275 (68%), Gaps = 9/275 (3%) Strand=Plus/Minus Query 66251 GGCGGAGCTCGAAGGGGACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTC 66310 ||| || ||||||| || || || ||| || |||||||| |||||||||||| Sbjct 292 GGCCGAAATCGAAGGCGAAATGGGTGACCAGCTGCCGGGCCTGCAGGCCCGCCTGATGAG 233 Query 66311 TCAGGCCATGCGCAAGCTGACCGGCACGATTGCCAGCACCAACACGCTCACCCTGTGGGT 66370 |||||| |||||||||||||||||| || || ||||||| || | | | Sbjct 232 CCAGGCCCTGCGCAAGCTGACCGGCAACATCAAGCGCTCCAACACCCTGGTGGTCTTCAT 173 Query 66371 GAATCAGCTGCGCGAGAAGATCGGC------AACGTGGGCTACGGCCCGAATGAGACCAC 66424 || ||||||||| |||||||||| | |||| | ||||| | | | || Sbjct 172 CAACCAGCTGCGCATGAAGATCGGCGTGATGATGCCGGGCCAGAGCCCGGAAGTG---AC 116 Query 66425 CACCGGTGGTAAGGCTCTGCGCTTCTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGC 66484 |||||| || || || ||| ||||||||||||||||| |||| |||| | |||| Sbjct 115 CACCGGCGGCAACGCACTGAAGTTCTACGCCTCGGTGCGCCTGGACATCCGTCGTATCGG 56 Query 66485 CACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACC 66519 | | ||| | ||||| ||| ||||||||| Sbjct 55 CGCGATCAAGAAGGGCGACGAGATCATCGGCAACC 21 >seq430283 Length=268 Score = 95.1 bits (104), Expect = 6e-15 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 66044 CCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTCGACCCTGAGTA 66103 |||||||||||| |||| ||| || | |||||| ||||| || | |||||||| | ||| Sbjct 15 CCAGAAGGCCGGCGGCACCGCGGCGTTCATCGATGCCGAGCACGCGCTCGACCCGGTGTA 74 Query 66104 CGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCAGACACTGGCGA 66163 || || |||||| || | ||||| |||| || | ||||| || || ||||| Sbjct 75 TGCGGCCAAGCTCGGCGTCAACGTCGAGGATCTGCTGCTCAGCCAGCCGGATACCGGCGA 134 Query 66164 GCAGGCCCTGGAGATCGTTGACCTTCTCGT 66193 |||||| |||||||||| ||| | || || Sbjct 135 GCAGGCGCTGGAGATCGCCGACATGCTGGT 164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 240995148029132