Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq261736 461 8e-125 seq226684 174 2e-38 >seq261736 Length=27266 Score = 461 bits (510), Expect = 8e-125 Identities = 674/943 (71%), Gaps = 14/943 (1%) Strand=Plus/Plus Query 155934 CGCCATCAACTGGAACCGCGTGATCGACGAGAAGGACGCGGAGGTGTGGAACCGGCTGAC 155993 |||||||||||||||| | | |||||||| || ||| ||||||||||| ||||| Sbjct 9291 CGCCATCAACTGGAACAACATCGAAGACGAGAAAGATCTGGAAGTGTGGAACCGCCTGAC 9350 Query 155994 CAACAACTTCTGGCTGCCGGAGAAGATCCCGGTGTCCAATGACGTCCAGTCGTGGCACCA 156053 || |||||||||||||||||| ||| | ||| |||| || || | | | ||||| || Sbjct 9351 CAGCAACTTCTGGCTGCCGGAAAAGGTACCGCTGTCTAACGATATTCCGGCGTGGAACTC 9410 Query 156054 GCTGACCGAGGAAGAGCGCCTGATCACCATGCGGGTGTTCACCGGCCTGACGATGCTGGA 156113 |||| | || |||| | | | ||||| || |||||||||||||||||| |||| || Sbjct 9411 CCTGAATGCCGATGAGCAACAGCTGACCATCCGCGTGTTCACCGGCCTGACGCTGCTCGA 9470 Query 156114 CACCATCCAGGGCACCGTCGGCGCGGTCTCGCTCATCCCGGACGCCATCACCCCGCACGA 156173 ||||||||| |||| ||||||| |||| || | || || | || ||||| || Sbjct 9471 TACCATCCAGAACACCCTCGGCGCTCCGGCGCTGATGGCCGATGCGCTGACGCCGCATGA 9530 Query 156174 GGAGGCGGTGTACACCAACATCGCGTTCATGGAGAGC-GTGCACGCACGCAGCTA---CT 156229 ||||| ||| | |||||| || ||||| ||| ||||| || ||| || || Sbjct 9531 AGAGGCCGTGATGTCGAACATCAGCTTTATGGA-AGCGGTGCATGCCCGCTCATACAGCT 9589 Query 156230 CGAACATCTTCTCGACGCTGTGCTCCACCAAGGAGATCGACGCCGCGTTCCGCTGGTCGG 156289 || |||||||| ||||||||| ||||| || | || ||||| | | |||| | Sbjct 9590 CG---ATCTTCTCCACGCTGTGCCACACCAGCGATGTTGATGCCGCCTACGCCTGGAGCG 9646 Query 156290 AGGAGAACGCCAACCTGCAGAAGAAGGCTGAGATCGTGCT-CAGCTACTACAACGGTGAC 156348 | ||||| || |||||| ||||| |||||| | || |||| ||||| ||| || Sbjct 9647 AAGAGAATCCCCCGCTGCAGCGCAAGGCCGAGATCATTCTGCAGC-ACTACTACGAGAAC 9705 Query 156349 GACCCGCTCAAGCGCAAGGTCGCCTCCACGCTGCTGGAGGGCTTCCTGTTCTACAGCGGC 156408 |||||||| ||| ||| ||||| | | | || || |||||||||||| |||| Sbjct 9706 GACCCGCTAAAGAAGAAGATCGCCAGCGTGTTCCTCGAATCGTTCCTGTTCTACTCCGGC 9765 Query 156409 TTCTACCTGCCGATGTTCTGGTCGTCGCGAGGCAAGCTCACCAACACCGCCGACATGATC 156468 |||||||||||||||| ||||||| || |||||||| || ||||||||||| ||||| Sbjct 9766 TTCTACCTGCCGATGTACTGGTCGAGCCGCGGCAAGCTGACTAACACCGCCGATCTGATC 9825 Query 156469 CGGCTCATCATCCGGGACGAGGCCGTGCACGGCTACTACATCGGCTACAAGTTCCAGAAG 156528 || || || ||| || ||||| || ||||| ||||||||||||||||||| ||||| Sbjct 9826 CGTCTGATTATCAAAGATGAGGCGGTTCACGGTTACTACATCGGCTACAAGTATCAGAAA 9885 Query 156529 GGCCTGGAGAAGGAGACCAAGGCCCGCCAGCAGGAACTCAAGGACTACACCTATGAGCTG 156588 | |||||| || ||||| | || | |||| || | | | | || ||| ||| Sbjct 9886 GCCCTGGAAAAAGAGACGCCGCAGCGTAAAGAGGAGCTGCAACAGTTCGCCGTTGAACTG 9945 Query 156589 CTGTTCGAGCTGTTCGACAACGAGCAGGAGTACACCCAGGACCTCTACGACGCCACCGGC 156648 ||| | | ||||| || || || || || ||| | | || |||| | | |||| Sbjct 9946 CTGCTGGCGCTGTATGAAAATGAAATTGAATATACCGATGCGCTGTACGCAGGCGTCGGC 10005 Query 156649 CAGACCGAGGACGTGAAGAAGTTCCTGCGGTACAACGGCAACAAGGCCCTGCAGAACCTG 156708 | || || ||||| |||||| ||| ||||| | |||||||| ||| |||||| Sbjct 10006 TGGCAGGAAGAGGTGAAAAAGTTCTTGCATTACAATGCTAACAAGGCGCTGATGAACCTC 10065 Query 156709 GGCTACGACGCGCTGTTCAGCCGCAGCGACTG--CGACGTCAACCCGGCCATCCTGAGCG 156766 |||||||| ||||||||| || | | || || ||| || |||||||| ||||| | Sbjct 10066 GGCTACGAGGCGCTGTTC-CCCTCTGAGA-TGACCGATGTTAACCCGGCTATCCTCTCGG 10123 Query 156767 CGCTGTCGCCCGGTGGAGACGAGAACCACGACTTCTTCTCGGGGTCGGGCAGCACGTACG 156826 |||||||||| | || || ||||||||||||||||| || || ||| | | || | Sbjct 10124 CGCTGTCGCCAAACGCCGATGAAAACCACGACTTCTTCTCCGGCTCCGGCTCCTCCTATG 10183 Query 156827 TCATGGCCAAGGGTGTGGTCACCGAAGACGACGACTGGGACTT 156869 | |||| || | || | |||||||| || |||||| |||| Sbjct 10184 TGATGGGTAAAGCGGTCGATACCGAAGATGAAGACTGGAACTT 10226 >seq226684 Length=3079 Score = 174 bits (192), Expect = 2e-38 Identities = 352/516 (68%), Gaps = 10/516 (2%) Strand=Plus/Plus Query 155935 GCCATCAACTGGAACCGCGTGATCGACGAGAAGGACGCGGAGGTGTGGAACCGGCTGACC 155994 || || |||||||||||| | || || || || || |||||||| || || ||| Sbjct 805 GCAATTAACTGGAACCGCATTCAGGATGACAAAGATCTTGAAGTGTGGAATCGTCTCACC 864 Query 155995 AACAACTTCTGGCTGCCGGAGAAGATCCCGGTGTCCAATGACGT-CCAGTCGTGGCACCA 156053 | ||||||||||||||| ||||| | ||| | ||||| || | || | | ||||| Sbjct 865 AGCAACTTCTGGCTGCCCGAGAAAGTGCCGCTCTCCAACGATCTGCCCGGC-TGGCAGAC 923 Query 156054 GCTGACCGAGGAAGAGCGCCTGATCACCATGCGGGTGTTCACCGGCCTGACGATGCTGGA 156113 |||| | || ||| | | | ||||| ||||| ||||||||||||||| |||| || Sbjct 924 GCTGGATAAACAACAGCAGCAGCTGACCATCCGGGTATTCACCGGCCTGACGCTGCTCGA 983 Query 156114 CACCATCCAGGGCACCGTCGGCGCGGTCTCGCTCATCCCGGACGCCATCACCCCGCACGA 156173 ||| |||||| | |||||||| ||| || || ||||| ||||||||||| Sbjct 984 CACTATCCAGAACGTGATCGGCGCGCCGGGGCTGATGGAAGATGCCATTACCCCGCACGA 1043 Query 156174 GGAGGCGGTGTACACCAACATCGCGTTCATGGAGAGC-GTGCACGCACGCAGCTAC---T 156229 ||||||||| | || ||| || ||||| ||| ||||| || ||| |||| | Sbjct 1044 AGAGGCGGTGCTGTCGAATATCAGCTTTATGGA-AGCGGTGCATGCCCGCTCCTACAGTT 1102 Query 156230 CGAACATCTTCTCGACGCTGTGCTCCACCAAGGAGATCGACGCCGCGTTCCGCTGGTCGG 156289 || |||||||| || ||||| |||| |||| | || || || | | ||| | Sbjct 1103 CG---ATCTTCTCAACCCTGTGTAACACCCAGGATGTGGATGCAGCTTATCAGTGGAGCG 1159 Query 156290 AGGAGAACGCCAACCTGCAGAAGAAGGCTGAGATCGTGCTCAGCTACTACAACGGTGACG 156349 | ||||| || |||||||| ||||| ||| | || ||||| | | || | Sbjct 1160 AAGAGAATGCGCCGCTGCAGAACAAGGCGCGCATCATCCTGGAACACTACCAGGCCGATG 1219 Query 156350 ACCCGCTCAAGCGCAAGGTCGCCTCCACGCTGCTGGAGGGCTTCCTGTTCTACAGCGGCT 156409 | ||||| ||| ||| ||||| | | || ||| || ||||||| ||||| Sbjct 1220 ATCCGCTGAAGAAGAAGATCGCCAGCGTCTTCCTTGAGTCGTTTTTGTTCTATTCCGGCT 1279 Query 156410 TCTACCTGCCGATGTTCTGGTCGTCGCGAGGCAAGC 156445 ||| |||||||||| ||||||| || ||||||| Sbjct 1280 TCTGGCTGCCGATGTACTGGTCGAGCCGTGGCAAGC 1315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 523312287751920