Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq189152 93.3 3e-14 seq248630 86.0 4e-12 >seq189152 Length=79535 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || | | ||| | || |||||||| || ||||| |||||||||||| | Sbjct 37775 CCACCTCTCAGGCGGAGAACAAGGTGGAGGGTAGACTCCTTTTGGATGTTGTAATCG--G 37832 Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 ||| || | || |||| || |||||||| |||| | | ||||||||| | Sbjct 37833 CCAATGTCCGGCCATCCTCTAGCTGCTTGCCAGCAAATATGAGCCTCTGTTGGTCCGGAG 37892 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| || |||||||| ||| ||| ||| ||| | || || ||||| | | || | Sbjct 37893 GAATGCCCTCCTTGTCCTGAATCTTGGCTTTAACATTGTCAATGGTATCTGAACTCTCGA 37952 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | || || || || ||||| || || || ||||| || ||||| Sbjct 37953 CCTCAAGAGTGATAGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 38001 >seq248630 Length=92124 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAAT-TCTCGCGTCTT 15025 ||| || || ||||| || ||||| || ||||||||||| ||| | | || | || | Sbjct 18060 AACCAAGTGGAGGGTGGACTCTTTCTGAATGTTGTAATCAGCAAGAGTGTGTC-CATCCT 18118 Query 15026 CTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCAC 15085 | | ||| ||||| || ||||||| ||||| ||||| || || || |||||||| Sbjct 18119 CAAGTTGCTTGCCGGCAAATATCAACCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTT 18178 Query 15086 AAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145 || || ||| ||| | || || |||||| | || || || | ||| ||||| | Sbjct 18179 GGATCTTCACTTTGACATTGTCAATCGTATCGGAAGACTCAACCTCGAGGGTGATGGTCT 18238 Query 15146 TACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | | || || || || ||||| |||||||| Sbjct 18239 TGTCGGTGAGGGTCTTCACAAAGATTTGCAT 18269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355217535601985