Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq141175 109 5e-19 seq34210 98.7 9e-16 seq39020 95.1 1e-14 seq248630 87.8 2e-12 seq103631 87.8 2e-12 seq213435 86.0 6e-12 seq127763 86.0 6e-12 seq70284 86.0 6e-12 seq205071 82.4 7e-11 seq126136 82.4 7e-11 >seq141175 Length=38247 Score = 109 bits (120), Expect = 5e-19 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || |||||||| | ||| || || || || || ||||| ||||| || || || Sbjct 25700 ATGCCACCACGGAGCCTGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCT 25641 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| || | || || || ||| | ||||| || ||||||||||| Sbjct 25640 GCCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGA 25581 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || ||||| || || || || || || |||| || | || | ||||||||| ||||| Sbjct 25580 GGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGA-CGTTGTCGATGGTGTCGGAGGACTC 25522 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||| ||||| || | || |||||||| || || || ||||| || |||||| Sbjct 25521 GACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATC 25470 >seq34210 Length=56267 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | | ||| ||||| || || || ||||| ||||| || |||||| Sbjct 23103 CCACCACGGAGGCGGAGCACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGCA 23044 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| ||| || | || || || ||| | |||| || |||||||||||||| Sbjct 23043 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 22984 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 ||||| || || || || || || |||| || | || | ||||||||| ||||| || Sbjct 22983 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGGACTCCAC 22925 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || | || |||||||| || || || || || || ||||| Sbjct 22924 CTCAAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 22877 >seq39020 Length=39705 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || |||||||| | ||| || || || || || ||||| ||||| || || || Sbjct 16263 ATGCCACCACGGAGCCTGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCA 16322 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| || | || || || ||| | || | || ||||||||||| Sbjct 16323 GCAAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGA 16382 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || ||||| || || || || ||||| |||| || | || | ||||| || ||||| Sbjct 16383 GGGATGCCCTCCTTGTCCTGGATTTTGGCCTTGA-CGTTGTCGATAGTGTCCGAGGACTC 16441 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| || || || | || |||||||| || || || |||||||| ||||| Sbjct 16442 GACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCAT 16492 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || |||||||| | ||| || || || || || ||||| ||||| || || || Sbjct 16491 ATGCCACCACGGAGCCTGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCA 16550 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| || | || || || || | || | || ||||||||||| Sbjct 16551 GCAAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGA 16610 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || ||||| || || || || ||||| |||| || | |||||| || |||||| Sbjct 16611 GGGATGCCCTCCTTGTCCTGGATTTTGGCCTTGACATTGTCGATGGTGTCCGATGACTCG 16670 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || ||||| || | || |||||||| || || || ||||| || |||||| Sbjct 16671 ACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATC 16721 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | | ||| | || || || || ||||| ||||| ||||| || Sbjct 15582 CCACCACGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCCGCC 15641 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| ||| || | || || || ||| | |||| || ||||||||||| ||| Sbjct 15642 AGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 15701 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 ||||| || || || || ||||| || | || | |||||| || ||||| || Sbjct 15702 ATGCCCTCCTTGTCCTGGATTTTCGCCTTCACATTGTCAATGGTGTCAGAGGACTCAACC 15761 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| | || |||||||| || || || ||||| |||||||| Sbjct 15762 TCCAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 15808 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || | |||||| | ||| || || || || || ||||| ||||| ||||| || Sbjct 16035 ATCCCACCCCTGAGCCTGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCC 16094 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| || | || || || ||| | || | || ||||||||||| Sbjct 16095 GCCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGG 16154 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || ||||| || || || || || || |||| || | || | |||||| || ||||| Sbjct 16155 GGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGA-CGTTGTCGATGGTGTCCGAGGACTC 16213 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || | || |||||||| || || || |||||||| ||||| Sbjct 16214 AACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCAT 16264 >seq248630 Length=92124 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| || | ||| || || || ||||||| || |||||||| || || ||||| || || Sbjct 18114 ATCCTCAAGTTGCTTGCCGGCAAATATCAACCGCTGCTGGTCTGGGGGGATGCCCTCCTT 18173 Query 45245 ATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||| || || ||||| || | || ||||||||||| || ||||| || | Sbjct 18174 GTCTTGGATCTTCACTTTGACATTGTCAATCGTATCGGAAGACTCAACCTCGAGGGTGAT 18233 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||| |||| || || || ||||| |||||||| Sbjct 18234 GGTCTTGTCGGTGAGGGTCTTCACAAAGATTTGCAT 18269 >seq103631 Length=82367 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || |||| || || || || || || || ||||| ||||| || ||||| Sbjct 32728 ATGCCACCACGCAGCCGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCA 32787 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| |||| || || || || | || | || ||||||||||| Sbjct 32788 GCAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATAAGGCGCTGCTGGTCCGGG 32847 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 |||||||| || || || || || || |||| || | || | ||||||||| ||| Sbjct 32848 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTCTC 32906 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || ||||| || | || |||||||| || || || ||||| || |||||| Sbjct 32907 AACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATC 32958 >seq213435 Length=177575 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || |||||||| | | ||| || || || || || ||||| ||||| || || ||| | Sbjct 106294 CCACCGCGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 106353 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| | ||| |||| || || || || | |||| || ||||||||||| || Sbjct 106354 AGGGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGG 106413 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 ||||| || || || || || || || | || | |||||| || ||||| || Sbjct 106414 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCTGAGGACTCAACC 106473 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || | || ||||| || || || || ||||| || ||||| Sbjct 106474 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 106520 >seq127763 Length=95897 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| || ||||| | ||| || || || || || ||||| ||||| ||||| || Sbjct 72678 ATGCCTCCACGAAGCCTGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCT 72619 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| || | || || || ||| | || | || ||||||||||| Sbjct 72618 GCCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGA 72559 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || ||||| || ||||| || || ||| || | || | |||||| || ||||| Sbjct 72558 GGGATGCCCTCCTTATCCTGGATCTTTGCCTTCACATTGTCGATGGTGTCCGAGGACTCC 72499 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | || | || |||||||| || || || || ||||| ||||| Sbjct 72498 ACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 72449 >seq70284 Length=100422 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || || | || ||| || || || || || ||||| |||||||| || ||| Sbjct 35668 ATGCCACCACGCAGGCGCAGCACAAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCG 35727 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| ||| |||| || || || || | |||| || ||||||||||| Sbjct 35728 GCGAGGGTACGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGG 35787 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 |||||||| || || || || || || |||| || | ||||| || ||| Sbjct 35788 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATTGTGTCAGAGCTCTCA 35847 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || | || |||||||| || || || |||||||| ||||| Sbjct 35848 ACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCAT 35897 Score = 82.4 bits (90), Expect = 7e-11 Identities = 159/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || || | || || || || || || || ||||| ||||| || || || Sbjct 36124 ATGCCACCACGCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCA 36183 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| |||| || || || ||| | || | || ||||||||||| Sbjct 36184 GCAAGGGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGA 36243 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 |||||||| || || || || || || |||| || | || | ||||||||| ||| Sbjct 36244 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTCTC 36302 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || ||||| | || |||||||| || || || ||||| || |||||| Sbjct 36303 CACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATC 36354 >seq205071 Length=52228 Score = 82.4 bits (90), Expect = 7e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || |||||||| | | ||| || || || || || ||||| ||||| || || ||| | Sbjct 3929 CCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 3870 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| || || | || || || ||| | || | || |||||||||||||| Sbjct 3869 AGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 3810 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 ||||| || || || || || || |||| || | || | |||||| || ||||| || Sbjct 3809 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCCGAGGACTCCAC 3751 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || || | || ||||| || || || || || || || |||||| Sbjct 3750 CTCCAGCGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATC 3702 >seq126136 Length=5165 Score = 82.4 bits (90), Expect = 7e-11 Identities = 153/222 (69%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 45121 GGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTT 45180 ||||||| | ||| || || || || || ||||| ||||| | || || | ||| Sbjct 2565 GGAGCCTTAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTCGTAGTCAGCCAGGGTGC 2506 Query 45181 TAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTT 45240 | ||| || | || || || || | || | | ||||||||||| || || || | Sbjct 2505 GACCATCCTCGAGCTGCTTGCCAGCAAAGATGAGATGCTGCTGGTCCGGAGGGATACCCT 2446 Query 45241 CTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGA 45299 | ||||| || || || |||| || | || |||||||| || |||||||| ||||| Sbjct 2445 CCTTATCCTGGATCTTAGCCTTGA-CGTTGTCGACGGTGTCCGAGGACTCGACCTCGAGG 2387 Query 45300 GTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || | || |||||||| || | || ||||| || |||||| Sbjct 2386 GTGATGGTCTTGCCGGTGAGGATCTTCACAAAGATCTGCATC 2345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449182581381160