Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_014461.1 Length=73453 Score E Sequences producing significant alignments: (Bits) Value seq30176 86.0 3e-12 seq223569 82.4 4e-11 seq119848 82.4 4e-11 >seq30176 Length=2762 Score = 86.0 bits (94), Expect = 3e-12 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 61302 TCGTTAGCTCAGTTGGTAGAGCTGCCGACTCTTAATCGGTAGGTCGCAGGTTCAAATCCT 61361 |||||||||||||||||||||| | |||| |||||| | ||||||||||||||||||| Sbjct 2116 TCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCAAATCCT 2057 Query 61362 GCACG 61366 ||||| Sbjct 2056 GCACG 2052 >seq223569 Length=13158 Score = 82.4 bits (90), Expect = 4e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 61302 TCGTTAGCTCAGTTGGTAGAGCTGCCGACTCTTAATCGGTAGGTCGCAGGTTCAAATCCT 61361 |||||||||||||||||||||| | |||| |||||| | |||||||||||| |||||| Sbjct 12709 TCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCT 12650 Query 61362 GCACG 61366 ||||| Sbjct 12649 GCACG 12645 >seq119848 Length=1010 Score = 82.4 bits (90), Expect = 4e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 61302 TCGTTAGCTCAGTTGGTAGAGCTGCCGACTCTTAATCGGTAGGTCGCAGGTTCAAATCCT 61361 |||||||||||||||||||||| | |||| |||||| | |||||||||||| |||||| Sbjct 555 TCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCT 496 Query 61362 GCACG 61366 ||||| Sbjct 495 GCACG 491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 233495457390734