Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_014663.1 Length=169947 Score E Sequences producing significant alignments: (Bits) Value seq65234 125 8e-24 >seq65234 Length=1614 Score = 125 bits (138), Expect = 8e-24 Identities = 519/808 (64%), Gaps = 37/808 (5%) Strand=Plus/Plus Query 147764 CATAGTCCATGTGACGGATACGGTTTTCTTCAATACCTTTGTTGTTCTTGAGAACCATCA 147823 |||| || | ||||| | | ||||||||||| ||| | || || || | ||| | | Sbjct 672 CATAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCTATTATTTTTTAAAACTAATA 731 Query 147824 AGTTCTCACATTCAAGGTGCCAAATCGGCCAGTAGCAAGTTGCCGAACCTTTACGAATAC 147883 | || ||| ||| || ||||| || || | | |||||| | ||| | || | Sbjct 732 AATTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTTGCGGCCCCTCCTCTAACTC 791 Query 147884 CACCCTGTGAACAAGAGTGTACAGCAGCATTTTTAAGT--TTCCAGAATGGTGTAACACC 147941 |||| || |||||||| | ||| || || ||| |||| || | || || || || Sbjct 792 CACCTTGAGAACAAGATTTTACTGC-GC-TTTGGAAGTGTTTATAAAAAGGAATACATCC 849 Query 147942 GGTGTGCTTAACTTCACCAGGACCAATCTTAGAACCTTCAGCTCGGATTGCTCCTCCACT 148001 ||| || |||| ||| | || | ||| |||||| ||| || | | Sbjct 850 GGTATGAAATGCTTCTCCATTTCTGATAGGACTTCCTAAAGCTCGAATTTGACCAGCGTT 909 Query 148002 GATGCCAATACCTGCTCGTTTAGACACATATTTTACAATAGCTGATGTGGTTTCAGTAAT 148061 ||||| || |||||||||| ||| |||||||||||||| || || || || |||| Sbjct 910 AATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAATTGCACTAGTTGTAGCATTAAT 969 Query 148062 TGATTCTAAATCGTCGCCAGTTTCAATCAATACACACGAACTGAATTGACGTGTTGGAGT 148121 || | ||||| || || |||||| || ||||| ||||| |||||||| ||||| || Sbjct 970 AGAGTTTAAATTATCTGCACATTCAATTAACACACAAGAACTAAATTGACGAGTTGGTGT 1029 Query 148122 CCGGACACCTGCAAGAATAGGAGTTGGCAAACTAATTTTGAATTGCGATGCAGCATCATA 148181 | || |||| | ||| || || || | | ||||| || || |||| ||| Sbjct 1030 TCTTACTCCTGACATAATCGGTGTGGGTAGAGATATTTTAAAAGTGGAAATTGCATTATA 1089 Query 148182 AAAATCTTTGATGTATTGCAAACGTTTTGCTGGGTTTTCGT-TTTGG--TGTAAGCACAT 148238 ||| | || || | || ||| | | ||||||| ||| | |||||| Sbjct 1090 AAAGCGCTGAATATAATTCATACGAATATTT---TTTTCGTATTTAGAAAATAAGCATGC 1146 Query 148239 ACCAATGAGCATGTACAAGAACTGCGGAGTTTCAAAAATTTCACCAGATGAGCGATCTTT 148298 | || | || || || || || | | ||||| | ||||| |||| |||| || Sbjct 1147 AGATATTAAAATATATAAAAATTGTGCACTTTCATATATTTCTCCAGTAACACGATTTTG 1206 Query 148299 TACAAGATACTTATCTTTCATTTGCATTGTAC--CGGCATAGGTGAAATTGAAGTCGCGA 148356 || | |||||| ||| | ||| || ||| | ||||| | ||||| | ||| || Sbjct 1207 TAATAAATACTTTCCTTCTAATTG--TTTTACTGCTGCATAAGAAAAATTCATGTCACGC 1264 Query 148357 TCATGATCAATCATTGCATTCAATGCATCAAATTCTTCACGAGTATAACGTT-CAATAAT 148415 |||||| || | || ||||| | | || |||||| | || |||| || |||||| Sbjct 1265 CAATGATCGATAAATGAATTCATTTCTACATATTCTTTAAAAGAATAATTTTGTAATAAT 1324 Query 148416 TTCTGGGTCATAGATTCCTACAT----CAGTTTTTGCGACGACATGATCATACA----AA 148467 || | |||||| |||||| || || ||||| ||||||| ||||| || Sbjct 1325 TT-TTCGTCATATTTTCCTAAATTGACCATTTTTT----TTACATGATGATACAGAATAA 1379 Query 148468 TG---------AGGTGGATCGAATTGCCCATAGACTTCTTTGCGAAGACCGAATTGTGCA 148518 || |||||| || ||||| || || ||| ||| | |||| || ||| Sbjct 1380 TGATACAGAATAGGTGGTTCAAATTGACCGTAAGCTTTTTTCCTAAGATGAAAAATAGCA 1439 Query 148519 AGATTAGATGCAACGTATTGATAATCAG 148546 || | | ||| | ||||||||||||| Sbjct 1440 AGTCTTGCTGCCATATATTGATAATCAG 1467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540309554302120