Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_015272.2 Length=88322 Score E Sequences producing significant alignments: (Bits) Value seq177757 91.5 8e-14 >seq177757 Length=1021 Score = 91.5 bits (100), Expect = 8e-14 Identities = 161/235 (69%), Gaps = 5/235 (2%) Strand=Plus/Plus Query 42897 CTGGACAAAACCCTGTCCATGTTCACCGAGATGGACCGGACAGTCGGCGAGGGCTACACC 42956 || || ||||| || | | ||||||| || ||||| ||| || || || || || || Sbjct 532 CTAGATAAAACTCTTTGCTTGTTCACTGAAATGGATAAGACTGTTGGTGAAGGGTATACA 591 Query 42957 AAGCTCCTCCCGTACATCAAGAACAATGAGATTCGAAACTGGCTCATTACTGCCGCCTCC 43016 ||||| || || | ||| ||||| ||||| ||||||||| ||| || || ||| | Sbjct 592 AAGCTTCTGCCATTCATTAAGAATAATGAAATTCGAAACATGCTGATGACCTTCGCTGCG 651 Query 43017 CGTGAGGTGGTTCACCAGCGAGCTTATGC-----CCTGGCAGCCGAGGAGTTCGGGTTCA 43071 | || || ||||||||||| ||||| || || || || || || || || | Sbjct 652 AGGGAAGTTGTTCACCAGCGCGCTTACGCTCTTAACTTGCTGCTGAAACTTTTGGATTTA 711 Query 43072 CCGATGGCGATTGGAAAGCTTTTGCCTCCTACAAGGAGATGCGAGACAAACTGGA 43126 | || |||||||| ||| ||||| || ||||| ||| || ||||| || Sbjct 712 GCAATTCCGATTGGACAGCATTTGCTGAATATAAGGAAATGGTTGATAAACTTGA 766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 280786763625823