Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_015293.1 Length=30651 Score E Sequences producing significant alignments: (Bits) Value seq497144 80.6 5e-11 >seq497144 Length=1636 Score = 80.6 bits (88), Expect = 5e-11 Identities = 178/267 (67%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 2000 AACAACAATTTCAGTGGTGTACTTTTCTTGACCTTGTTGGTCAGTCCATTTGCGGGTTTT 2059 ||| |||| ||| ||||||||||| || || |||||||||||||| ||||| | Sbjct 1418 AACCACAACTTCGGTGGTGTACTTCTCAACGCCAGCCTGGTCAGTCCATTTACGGGTCTG 1359 Query 2060 TAACTTGCCTTCAATGTATAGCTTACTACCCTTACGTACATACTCGCCGATTATTTCAGC 2119 | |||||| || || | || | || ||||| | || || ||| | |||||| Sbjct 1358 CAGTGCGCCTTCGATATAAACCTGAGAGCCTTTACGCAGGTATTCACCGGCCACTTCAGC 1299 Query 2120 TAACTTTCCAAAAACAACAATTCTGTGCCACTCGGTTTCTTCTTTTGGCTCGCCAGTGCT 2179 | ||| || || | |||| | |||||| || |||| ||||| | ||||| || Sbjct 1298 CAGCTTGCCGAACAGCACAACGCGGTGCCATTCAGTTTTCTCTTTGGTTTCGCCGGTCTG 1239 Query 2180 TTTATCCTTCCATTTTTCGCTAGTTGCTAGAGTTAGGTTTGCCACTGCATTTCCGTTAGG 2239 || || ||| |||| || || ||||| | ||| || || ||| || || || Sbjct 1238 CTTGTCGCGCCAGGATTCGGAGGTAGCCAGAGTGATGTTGGCAACGGCACCGCCATTCGG 1179 Query 2240 TATGTAACGAATTTCTGGATCTTGACC 2266 ||||| |||| ||| || || || || Sbjct 1178 CATGTAGCGAACTTCCGGGTCCTGCCC 1152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97380859206026