Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_015295.1 Length=47279 Score E Sequences producing significant alignments: (Bits) Value seq36415 576 4e-160 seq201909 295 2e-75 seq194023 286 1e-72 seq259424 251 2e-62 seq248231 147 7e-31 seq499007 131 5e-26 seq292125 114 4e-21 seq10791 93.3 1e-14 seq434220 89.7 2e-13 >seq36415 Length=1575 Score = 576 bits (638), Expect = 4e-160 Identities = 655/878 (75%), Gaps = 3/878 (0%) Strand=Plus/Plus Query 24667 TTTCCATCTATCCAATCAGCCCACCACTGCATCATCTCGCGGCGCTTTTCAATATACTGC 24726 ||||| || ||||| |||||||||||||||||||| || || ||||| || | |||||| Sbjct 288 TTTCCGTCAATCCAGTCAGCCCACCACTGCATCATTTCTCGCCGCTTATCCAGATACTGA 347 Query 24727 GCGTGATTGTATATGCCGCGAATAGAGCCGCTGTCAGTGTGAGCCAGTTGCCTCTCGATA 24786 ||||| ||||| ||||| || | ||| ||||||| || ||| || || ||| |||| || Sbjct 348 GCGTGGTTGTAGATGCCACGTACAGATCCGCTGTTAGCGTGTGCAAGCTGCTTCTCAATG 407 Query 24787 GCATCGTGTGGCCATTCGTTTTCGTTCATGACTGTACTGAACTGGTGCCGAAAGCCGTGA 24846 ||||| |||||||| | ||||||||| | ||| ||||||||||| || || || || Sbjct 408 GCATCAGCGGGCCATTCATGTTCGTTCATTATTGTGCTGAACTGGTGGCGGAAACCATGC 467 Query 24847 CCGCTGGCAAGACCCTCATAGCCTATCTGCCGAATAACAAGCAATACGGCATTTTCGCTT 24906 ||||| ||||||||||| || |||||||||| || ||||| | ||||| |||||||| Sbjct 468 CCGCTCGCAAGACCCTCGTATCCTATCTGCCTGATGACAAGAAGAACGGCGTTTTCGCTA 527 Query 24907 ATCGGCTTTTTCTTATCATTGCGCCCGGCAAACACGAATGTTGATATTGGGGACGTAATA 24966 || | ||| || || ||||| | ||||||||||| || ||||||||| ||| || Sbjct 528 ATGGACTTCTTTTTGTCATTCCTTCCGGCAAACACAAAATCTGATATTGGTCCCGTTATG 587 Query 24967 GGTTGTAGTGTATTGAGCAAGTCCACTACCTGATGCGACATCGGCACCAGGTGGGTTCTA 25026 || | || | ||||| ||||| ||||| || |||||||| || | ||| ||| Sbjct 588 GGCTTTAACCCCTCAAGCAAATCCACGACCTGTTGTGACATCGGAACGATGTGAATTCGC 647 Query 25027 CGCCCCTTCATTACTCCTTCGTCGATAGTAATAGTCCTGGTTTCAAAATCGACGTTTTCC 25086 || |||||||| || |||| ||| || ||||||||||||||||| |||| || | | Sbjct 648 CGACCCTTCATCACCTGTTCGGAGATGGTTATAGTCCTGGTTTCAAAGTCGATGTCCTTC 707 Query 25087 CATTGCATAGAGCGCATTTCTTTAGTCCTAAGCGCTGTATACTGTAAGATTTGAGTTGCT 25146 ||| |||| ||||||| ||| |||| | ||||| || ||||| | | || ||||| Sbjct 708 CATAGCATGGAGCGCAGTTCGATAGTTCGGAGCGCCGTGTACTGAAGAACCTGCGTTGCC 767 Query 25147 ATTTTAGAAACTATACTCCCGGAAAAGCTGGACAGGGCGCGGTTGAATGCTGGTATCTGA 25206 | || ||||| || |||||||| |||| | ||| || || || || |||||||| Sbjct 768 ACCTTTGAAACGATGCTCCCGGAGAAGCCAGCCAGCGCTTTATTAAACGCAGGTATCTGG 827 Query 25207 TCTGCGGGTAGAAACGGATAGTTCTTTTTCCGATAGCCTTTCATCGCATCCGCAAGGTCT 25266 || ||||| || || || ||||||||||||||||| || ||||| || || || ||||| Sbjct 828 TCGGCGGGAAGGAAAGGGTAGTTCTTTTTCCGATATCCCTTCATGGCGTCAGCCAGGTCA 887 Query 25267 GGTGCCGGGTTGTATTTCGCACGCCCGGTGATGATGGCATAACGGAAAACCTCGCCACAC 25326 || |||||||| ||||| || |||||||| || || || || ||| || ||||| || Sbjct 888 GGCGCCGGGTTATATTTGGCTCGCCCGGTAATTATCGCGTA---GAATACTTCGCCGCAT 944 Query 25327 CGACGCCGCGCTTTGTTGGCTCTCTCCATCGCGCCGCGCTCTTCAAAGCGCCTTATCACA 25386 | |||| ||||| || || | |||||| |||||||| |||||| | | || || Sbjct 945 CTGCGCCTGGCTTTATTAGCGCGCTCCATGGCGCCGCGAGATTCAAACAGGCGAATGACT 1004 Query 25387 GAAAGAATTTGCATGGGGTCGATTTCGTTGATCTCGATACCGCCGATCATCGGCAAAATG 25446 ||||| | ||| || ||||| ||||| || || || ||||||||| || | ||| Sbjct 1005 TCCAGAATCTTCATTGGCTCGATGTCGTTAATGTCCATGGAGCCGATCATTGGAAGGATG 1064 Query 25447 TCATCTTCAAACATGCGGTAAAGTTCACTGGCATAGCCGACAGACCAGACCTGTTTTTTA 25506 ||||| |||||||||| | || || | || ||| ||||||| ||||||||||| Sbjct 1065 TCATCACGAAACATGCGGGATAGCTCGTCTCCGTACCCGGCAGACCACACCTGTTTTTTG 1124 Query 25507 TGCTCGTACCATTCTGCGTATATTGATGAGAATGTGTT 25544 || ||||||||||| || ||||||| ||| ||||| Sbjct 1125 TGATCGTACCATTCGGCATATATTGCCCCGAAAGTGTT 1162 >seq201909 Length=21394 Score = 295 bits (326), Expect = 2e-75 Identities = 266/332 (80%), Gaps = 3/332 (1%) Strand=Plus/Minus Query 34962 GGCTGATACCCACACAACTAAATTTCAACATGGAAACTATACGATATGGAACATGCAAAC 35021 || |||| | ||| |||||| ||||||||||||| ||||| ||||| || |||||| Sbjct 13747 GGGTGAT-CGCACGTAACTAA--TTCAACATGGAAATAATACGCAATGGACCACGCAAAC 13691 Query 35022 TACAGCAAACCGACACAGCGCGAGATTGATCGCGCAGAGACAGACTTACTCATCACGCTA 35081 |||||||||||||| |||||||||||||| || |||||||| |||||||| || ||||| Sbjct 13690 TACAGCAAACCGACTCAGCGCGAGATTGACCGTGCAGAGACTGACTTACTGATTACGCTC 13631 Query 35082 TCACAGCTTACTGGCAGAACGTTTGCAGACATGGCCGGATGGCACGAATCGAAAGTAAGT 35141 || |||||||| || | || ||||| |||| |||||||| ||| | || || || Sbjct 13630 TCCCAGCTTACCGGGCGTCAATTCGCAGAACTGGCTGGATGGCATGAAACTAAGGTCAGC 13571 Query 35142 CGAATGAACTGGCGAGATATCGCAACAGTGTTTTGTATCGCACGCATGGCAGTAGAGGTA 35201 | ||||||||||| ||||||||||| | || || || || | ||||||||||||||| Sbjct 13570 AGGATGAACTGGCGGGATATCGCAACGATTTTCTGCATTGCCAGGATGGCAGTAGAGGTA 13511 Query 35202 AGCCCACTTGGAAGAGCATTGCAGGGGGTTTATCAGGCGGTAGGTAATAAAAAAGCCCCT 35261 ||||| | ||||| || | || | | |||||||||| |||| ||||||||||||||| Sbjct 13510 AGCCCGATAGGAAGGGCGATTCAAGACGCTTATCAGGCGATAGGCAATAAAAAAGCCCCT 13451 Query 35262 GCGGTAACAGAGGCTGATTCACAAATCACTAT 35293 ||| |||||||||||||||||||||||| || Sbjct 13450 GCGCGAACAGAGGCTGATTCACAAATCACGAT 13419 Score = 93.3 bits (102), Expect = 1e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 31382 CCCTTCTGATTGAGGATTCTGGCGAGCTTAATAAAAAACTCAATAAGCGGGTTGCGTTTA 31441 || || ||||| ||| |||| || | ||||| || || || || || |||| || Sbjct 18590 CCTTTTTGATTTAGGGTTCTCGCAATGCGAATAAGAAGTTCGATTAGGGGATTGCTTTGG 18531 Query 31442 CAACAGTCGGTAGCACCCATGACGGTGCCGCCTGCGATGGCTAAATTCATCACGGGTGGT 31501 ||| |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 18530 TTTTTCTCGACAGCACCCATGACGGTGCCGCCTGCGATGGCATAATTCATCACGGGTGGT 18471 Query 31502 TTCCTTATT 31510 |||||| || Sbjct 18470 TTCCTTGTT 18462 >seq194023 Length=5833 Score = 286 bits (316), Expect = 1e-72 Identities = 264/332 (80%), Gaps = 3/332 (1%) Strand=Plus/Minus Query 34962 GGCTGATACCCACACAACTAAATTTCAACATGGAAACTATACGATATGGAACATGCAAAC 35021 || |||| | ||| |||||| ||||||||||||| ||||| ||||| || |||||| Sbjct 2326 GGGTGAT-CGCACGTAACTAA--TTCAACATGGAAATAATACGCAATGGACCACGCAAAC 2270 Query 35022 TACAGCAAACCGACACAGCGCGAGATTGATCGCGCAGAGACAGACTTACTCATCACGCTA 35081 |||||||||||||| |||||||||||||| || |||||||| |||||||| || ||||| Sbjct 2269 TACAGCAAACCGACTCAGCGCGAGATTGACCGTGCAGAGACTGACTTACTGATTACGCTC 2210 Query 35082 TCACAGCTTACTGGCAGAACGTTTGCAGACATGGCCGGATGGCACGAATCGAAAGTAAGT 35141 || |||||||| || | || ||||| |||| |||||||| ||| | || || || Sbjct 2209 TCCCAGCTTACCGGGCGTCAATTCGCAGAACTGGCTGGATGGCATGAAACTAAGGTCAGC 2150 Query 35142 CGAATGAACTGGCGAGATATCGCAACAGTGTTTTGTATCGCACGCATGGCAGTAGAGGTA 35201 | ||||||||||| ||||||||||| | || || || || | ||||||||||||||| Sbjct 2149 AGGATGAACTGGCGGGATATCGCAACGATTTTCTGCATTGCCAGGATGGCAGTAGAGGTA 2090 Query 35202 AGCCCACTTGGAAGAGCATTGCAGGGGGTTTATCAGGCGGTAGGTAATAAAAAAGCCCCT 35261 ||||| | ||||| || | || | | ||||||||| |||| ||||||||||||||| Sbjct 2089 AGCCCGATAGGAAGGGCGATTCAAGACGCTTATCAGGCTATAGGCAATAAAAAAGCCCCT 2030 Query 35262 GCGGTAACAGAGGCTGATTCACAAATCACTAT 35293 ||| |||||||||| ||||||||||||| || Sbjct 2029 GCGCGAACAGAGGCTAATTCACAAATCACGAT 1998 Score = 111 bits (122), Expect = 5e-20 Identities = 195/284 (69%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 33978 ATAGCATAGAGCTTCCCATCAACTAtttttttATTGTTGGTATCTACTGCAACAGTTGTA 34037 || || || | ||| ||||||| |||||||| | || || | || || || |||| | Sbjct 3316 ATGGCGTACATCTTGCCATCAATGATTTTTTTGTCGTCTGTGTTTATAGCCACCGTTGCA 3257 Query 34038 CCGTCAGGGATAATAGGCTCCATGCTATTCCCGGTGGCAGGAAAGCATAGCACCCCTTCG 34097 || |||| ||| | ||||||||||| | || || ||||||||||| | || Sbjct 3256 CCATCAGAGATTTTTGGCTCCATGCTGTCACCACGAGCGGGAAAGCATAGAATTCCCGAA 3197 Query 34098 CCGCTTGAATTTGCACCAACTCTGCGAAGAGTGGCCTTTGAAAATCTCAACATAAACCCA 34157 || | || ||||| || | || || ||||| || ||||||| | |||||| || Sbjct 3196 CCATCGGTGTTGGCACCGACACGCCGCAGTGTGGCTTTAGAAAATCGAAGCATAAATCCG 3137 Query 34158 TTATGATCTTCGCTGCTAAATGTCCCATCACCACAAGCGAACTCGATATCCTTCAAAAAA 34217 |||| || || | | | || | || ||||| || |||||||| || ||||| Sbjct 3136 TTATAGTCCTCATCGGAGACGCTACCGTTGCCGCAAGCAAATTCGATATCTTTTAAAAAT 3077 Query 34218 TGAACCTCTACTTCATCGTCGTCTAGAGGCGTTTCATTATCCCA 34261 ||||||| |||||||| || || || || ||||| |||| ||| Sbjct 3076 GGAACCTCAACTTCATCATCTTCAAGCGGGGTTTCTTTATTCCA 3033 >seq259424 Length=1118 Score = 251 bits (278), Expect = 2e-62 Identities = 267/350 (76%), Gaps = 4/350 (1%) Strand=Plus/Minus Query 35512 GGAGCGAAGAGTGGCAGACACCGATGATGGCTTTATCATGCTGGCTATGGAGCTGTATGA 35571 |||||| | |||||| || || |||||||| || |||||| | || ||| ||| ||||| Sbjct 1094 GGAGCGGAAAGTGGCTGATACTGATGATGGTTTCATCATGTTAGCAATGACGCTTTATGA 1035 Query 35572 GGAGCTTATTGGAGCTAACTTAACGAAGAACCAGCAGAAGATTGCACATGCTGTTTGTCG 35631 ||| || || || |||||| |||| || ||| ||| | || || || || ||||| Sbjct 1034 GGAACTGATAGGGGCTAACCTAACTCGCAATCAGGCCAAGGTGGCGCACGCCGTATGTCG 975 Query 35632 GAAAACATATGGCTTCAAAAAGAAGATGGATCGCATTGCTGACATCCAGCTAGCCAGCCT 35691 |||||||||||||| |||||||||||||| ||||| || || | |||| ||||| | Sbjct 974 TAAAACATATGGCTTTAAAAAGAAGATGGACCGCATAGCAGATAGCCAGTTAGCCGAGAT 915 Query 35692 TTGCAGAATAAGCAGGTCTAAAGCAAATATCGCTAAAAACCAACTCATTGAGATGGGTGT 35751 ||||||||| || || || |||||||| || ||||||||| | | ||| ||| ||| Sbjct 914 TTGCAGAATCAGTAGATCCAAAGCAAACATTGCTAAAAACGACTTGATTTCAATGAATGT 855 Query 35752 TCTACTGAAATCAAAGGGTCA--GATTGGCCCTAACAAAAACATATCTGAATGGAAAATA 35809 | |||| ||| |||| ||| ||||| || ||||| |||||| |||| ||| || Sbjct 854 TTTACTCAAA--GAAGGCTCAAGAATTGGTCCGAACAAGAACATAGCTGAGTGGCTTATT 797 Query 35810 CCTGACTGTTCCCAATTTGATAACTTTGTTACCAAAGAGGTAACAAATAA 35859 ||||||||||||||| | |||||| ||||||||||| || ||||||||| Sbjct 796 CCTGACTGTTCCCAAATAGATAACATTGTTACCAAATCGGGAACAAATAA 747 >seq248231 Length=1874 Score = 147 bits (162), Expect = 7e-31 Identities = 159/208 (76%), Gaps = 6/208 (3%) Strand=Plus/Minus Query 35164 CAACAGTGTTTTGTATCGCACGCATGGCAGTAGAGGTAAGCCCACTTGGAAGAGCATTGC 35223 |||| | || || || || | |||||||||||||||||||| | ||||| || | | Sbjct 1874 CAACGATTTTCTGCATTGCCAGGATGGCAGTAGAGGTAAGCCCGATAGGAAGGGCGATTC 1815 Query 35224 AGGGGGTTTATCAGGCGGTAGGTAATAAAAAAGCCCCTGCGGTAACAGAGGCTGATTCAC 35283 | || | |||||||||| |||| |||||||||||||||||| ||||||||||||||||| Sbjct 1814 AAGGCGCTTATCAGGCGATAGGCAATAAAAAAGCCCCTGCGCGAACAGAGGCTGATTCAC 1755 Query 35284 AAATCACTATCGAGTTCTA---ACAACCGACAGGAGTAATTAT-ACATGAGAAAGCACGT 35339 ||||||| || ||| || |||| | |||||||||||||| ||| | ||||| | Sbjct 1754 AAATCACGATGTCGTTTTAAGCACAAACAACAGGAGTAATTATGACA--AAAAAGCGCCG 1697 Query 35340 TTCAGGCCAGAAAACATTACATAAAAAC 35367 ||| |||| | | | ||||||||| Sbjct 1696 TTCTTACCAGGACAAACCGCATAAAAAC 1669 >seq499007 Length=4346 Score = 131 bits (144), Expect = 5e-26 Identities = 237/343 (69%), Gaps = 3/343 (1%) Strand=Plus/Minus Query 27689 TGTTCTCTTGCTGCTGCTTCGTCAATTGGGTCTGCGAATTTCATTTTGATATCTCCGAAA 27748 || || | |||||||||||||||||| |||||||| || ||||| || || |||| || Sbjct 1497 TGCTCGCGTGCTGCTGCTTCGTCAATAGGGTCTGCAAAATTCATGCTGCTACCTCCCCAA 1438 Query 27749 ATGCCTTCTCACACTGCAAGGCAAGGTTTTCTATTTTCTGCTGCATATCCTGAAAGGAGT 27808 ||||||| |||||||||| |||| | || || | |||||||||| |||||| | | Sbjct 1437 ATGCCTTTTCACACTGCAGCGCAATGCGGTCAATATGCTGCTGCATAGCCTGAATGCTCT 1378 Query 27809 TAATTTCATCGCT-CTTGATATCGTGAGAAACTAAAGCCTTAATCAGTTGCTCTAGCTTT 27867 | || | || ||| | || || | | | ||| ||| || ||||| ||||| Sbjct 1377 GTACGTC-TGACTGCTTAACGTCATGCGTGATGAGCGCCCGAATTAGCTGCTCCAGCTTC 1319 Query 27868 GAGAAGTAACCCAGCCGCGCTTTCGTTTCCTGCCCTGCGGTCTTTCCTTGCTGAACGATT 27927 | | ||||||| || || | || || | ||| ||||| | | || || ||| | Sbjct 1318 GCGTAGTAACCAAGACGAACCTTTGTCTGCTGGCCTGCATTATCACCACGCGTTACGGTG 1259 Query 27928 CGCACTTCATACAAAATAAAGTCGTGCGCGTTACTTTCGATGATGTATTTATCACCAATG 27987 || | ||| | | || |||||||| ||| | |||||||||||| || | || Sbjct 1258 CGAAGCTCAGAAAGGATGAAGTCGTGGGCGCCGCCTTCGATGATGTAGCGGTCGTCGATT 1199 Query 27988 TTGATATTCAATTTTATATCTCCGAATTACAGGCGTaaaaaaa 28030 |||| ||| || ||| |||||| | |||||||||||||| Sbjct 1198 GTGATTTTC-ATGGTATTTCTCCGTTATTCAGGCGTAAAAAAA 1157 >seq292125 Length=1950 Score = 114 bits (126), Expect = 4e-21 Identities = 153/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 976 TTCTCGACAAGTATTTTTCTGGTGAGCTTCA--GCATAAGCACAGCCTTAGCGCTGAACT 1033 |||| || | ||||| | ||| | ||||| ||| |||| | || |||||| | | Sbjct 1268 TTCTTGATGATTATTTCACAGGTCAACTTCAACGCAGAAGCTCT--CTCAGCGCTCAGTT 1211 Query 1034 TAACATGAAATGTATTGAGTTTGACCAAAAGAAAGATATGGCCAGCTTCTGCGGACAAGG 1093 || || |||||||| ||||||||||| |||||||||||||| || || ||||| || || Sbjct 1210 GAATATTAAATGTATGGAGTTTGACCAGAAGAAAGATATGGCGAGTTTTTGCGGGCAGGG 1151 Query 1094 GCTTGCCGGATGGAAGCACGAAAAGCCCGCACTTATTTCAGCAATaaaaaaaCTGGCAGG 1153 | | || || ||||| || ||||| | | || || | | ||||| ||| || | Sbjct 1150 GTTGGCTGGCTGGAAACATGAAAAAGCTGTTCTGGTTGCTGAGATAAATTCTCTGACAAG 1091 Query 1154 GCAGCTACAGATAACCATCCCTGGGCTGGAG 1184 ||| |||||||| |||| |||| ||||||| Sbjct 1090 TCAGTTACAGATATCCATACCTGAGCTGGAG 1060 >seq10791 Length=1774 Score = 93.3 bits (102), Expect = 1e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 31382 CCCTTCTGATTGAGGATTCTGGCGAGCTTAATAAAAAACTCAATAAGCGGGTTGCGTTTA 31441 || || ||||| ||| |||| || | ||||| || || || || || |||| || Sbjct 1119 CCTTTTTGATTTAGGGTTCTCGCAATGCGAATAAGAAGTTCGATTAGGGGATTGCTTTGG 1060 Query 31442 CAACAGTCGGTAGCACCCATGACGGTGCCGCCTGCGATGGCTAAATTCATCACGGGTGGT 31501 ||| |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1059 TTTTTCTCGACAGCACCCATGACGGTGCCGCCTGCGATGGCATAATTCATCACGGGTGGT 1000 Query 31502 TTCCTTATT 31510 |||||| || Sbjct 999 TTCCTTGTT 991 >seq434220 Length=273 Score = 89.7 bits (98), Expect = 2e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 35609 AAGATTGCACATGCTGTTTGTCGGAAAACATATGGCTTCAAAAAGAAGATGGATCGCATT 35668 ||| |||||||||||||||| ||||| ||||| |||||||| ||||||| |||||| ||| Sbjct 23 AAGGTTGCACATGCTGTTTGCCGGAAGACATACGGCTTCAACAAGAAGACGGATCGTATT 82 Query 35669 GCTGACATCCAGCT 35682 ||||| | ||| || Sbjct 83 GCTGATAGCCAACT 96 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150275019428082