Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq115808 86.0 7e-12 >seq115808 Length=163311 Score = 86.0 bits (94), Expect = 7e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48599 AGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTT 48658 ||| || | ||| || | ||||| || |||||| ||||||| || || | || | Sbjct 94031 AGTGCCAGCATTGAAAAGGGTTGGGGAAGCATGAGTAAACCAGCGCTGGGACATCATGTG 93972 Query 48659 ATATGTTTCAATAACAGAATCTATATCC-CATTGATGTATACCTATAGATACACGCATTA 48717 ||||||| | | |||| || ||||| | ||| ||||| || | ||| || | ||||| Sbjct 93971 GTATGTTTTGACAGCAGACTCAATATCATCCTTG-TGTATCCCAACAGAAACCCTCATTA 93913 Query 48718 ACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCA 48777 |||||| ||| |||||||| |||| || | ||||| ||||| || | || | Sbjct 93912 ACATATGTTGTGGTCTTTCCACAACCTTCCCGCCAACTTTCAGTAGATAAGACCTCTCAA 93853 Query 48778 ATGTTTTAAAACCAAAATAGTTGTATGAAAAGTCGTTATCATTAATAAT 48826 || ||||||||||| | | ||| |||||| |||||| ||| || Sbjct 93852 GCGTCTTAAAACCAAAGAAATCGTAGTCAAAGTCTCTATCATAAATTAT 93804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 558601093534440