Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_016073.1 Length=157950 Score E Sequences producing significant alignments: (Bits) Value seq286911 104 2e-17 seq462907 100 3e-16 seq189010 98.7 1e-15 seq163857 82.4 8e-11 >seq286911 Length=6367 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 137449 TGGCCCCGTAGCTCAGTGGTTAGAGCAGTCGACTCATAATCGATTGGTCGCTGGTTCAAG 137508 ||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 5791 TGGCCCCTTAGCTCAGTGGTTAGAGCAGGCGACTCATAATCGCTTGGTCGCTGGTTCAAA 5732 Query 137509 TCCAGCCAGGGTCACCA 137525 ||||| ||| ||||| Sbjct 5731 CCCAGCAGGGGCCACCA 5715 >seq462907 Length=336 Score = 100 bits (110), Expect = 3e-16 Identities = 69/77 (90%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 137450 GGCCCCGTAGCTCAGT-GGTTAGAGCAGTCGACTCATAATCGATTGGTCGCTGGTTCAAG 137508 |||||| ||||||||| |||||||||| ||||||||||||| ||||||||||||||||| Sbjct 98 GGCCCCATAGCTCAGTTGGTTAGAGCACGCGACTCATAATCGCTTGGTCGCTGGTTCAAG 39 Query 137509 TCCAGCCAGGGTCACCA 137525 |||||| ||| ||||| Sbjct 38 TCCAGCTGGGGCCACCA 22 >seq189010 Length=996 Score = 98.7 bits (108), Expect = 1e-15 Identities = 74/86 (86%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 137449 TGGCCCCGTAGCTCAGTGGTTAGAGCAGTCGACTCATAATCGATTGGTCGCTGGTTCAAG 137508 |||||| |||||||||||| ||||||| ||||||||||||| |||||||||||||||| Sbjct 850 TGGCCCTTTAGCTCAGTGGTCAGAGCAGGCGACTCATAATCGCTTGGTCGCTGGTTCAAA 791 Query 137509 TCCAGCCAGGGTCACCACTAAATAAA 137534 |||||| |||| || | ||||||| Sbjct 790 TCCAGCAAGGGCCATTA--AAATAAA 767 >seq163857 Length=4767 Score = 82.4 bits (90), Expect = 8e-11 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 137944 TGTAGTTCAGTCGGTAGAACGGCGGTCTGTTAAACCGTATGTCGCAGGTTCAAGTCCTGC 138003 ||||||||||||||||||||||||| ||||||| ||||||||| | ||||| ||||| | Sbjct 4438 TGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGT 4379 Query 138004 CATCGTCGCCAGGATTA 138020 || | |||| ||||| Sbjct 4378 CAGAGGAGCCA-GATTA 4363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 502158720475600