Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_016765.1 Length=54024 Score E Sequences producing significant alignments: (Bits) Value seq75855 179 1e-40 >seq75855 Length=31220 Score = 179 bits (198), Expect = 1e-40 Identities = 322/468 (69%), Gaps = 2/468 (0%) Strand=Plus/Plus Query 10648 CATGCATCTGTCGATTGATTCGCTTAAAGAAGCTGGCGCCTTCACTGGGGCTCCTATCGA 10707 |||| | ||| | | ||||| || ||| || | ||||| ||||| || |||| | || Sbjct 6163 CATGAAACTGACACTCGATTCACTAAAAAAATCCGGCGCATTCACAGGTCGTCCTGTGGA 6222 Query 10708 GAAAGAGATCACCTGGAAACAGGGCGATAAGGAACTGACTGCAACCGTGTACGTCCGGCC 10767 ||| | ||||||||||| ||| | || | ||| | | || || |||| | |||| || Sbjct 6223 AAAACAAATCACCTGGAAGCAGCGTAATGAAGAATTAAGAGCCACGGTGTTCATCCGACC 6282 Query 10768 CTTGTCGTACAGCACAGCTGTTTCTGACCTTCTGG-CCATGAATGGCAAGGTGGATGGCG 10826 ||| ||| || || |||||| | |||| ||||| |||||||| || ||| Sbjct 6283 GTTGGGTTACCACAGCGCCACATCTGACGTACTGGCCCATG-TGGGCAAGGTTGACGGCA 6341 Query 10827 TAGCGGGTCGGATAGCCGCGTCAATCGTGGATGAAGAGGGTAAGCCGGTATTCACGCCGG 10886 | || || || || || || ||| |||||||| || | ||||| |||||||| Sbjct 6342 TTGCCGGGCGTATCGCAGCCAGCATCTGTGATGAAGATGGCCACCCGGTCTTCACGCCTC 6401 Query 10887 CAGATATCACCGGCGAGGCCGATCCCGGTCGCGGCGCGCTGGATGGAAACCTGACCATCG 10946 ||||| || |||||||| || |||| |||||||||||| ||||| ||||| |||| Sbjct 6402 AGGATATTACTGGCGAGGCTGACCCCGATCGCGGCGCGCTTGATGGCGCACTGACTATCG 6461 Query 10947 CCCTGCTCACCGTGATCGCCGAGGTGAACAACCTGGGAAAGACGACCAGCTCAGCGAACT 11006 | || || | || ||||||||| | ||||||||||| |||| ||||||| Sbjct 6462 CGCTCCTGGTTGCCATTCAGGAGGTGAACGATCTGGGAAAGACCACCAACTCAGCGCCGA 6521 Query 11007 AGATGAGGTGTGGCATGAGCTGGTGATGTGCGGGATTGGCGGCAGAACCATCGCAGAAGC 11066 ||| || | ||| ||||| || | || || ||||| ||||||||||| ||||| Sbjct 6522 AGACGAATTCTGGTGCGAGCTCGTCCTCAATGGAATCGGCGGAAGAACCATCGCCGAAGC 6581 Query 11067 CAAGTCGCGTCTCACCTACCGGGAGTTCCTGAGCTGGTGCAAGTTCCG 11114 || |||| || |||||||| || | |||| |||| ||| Sbjct 6582 CAGAGAAAACCTCAGCTTCCGGGAGTACCAGCTCTGGGTTAAGTACCG 6629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 171731064093572