Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_018452.1 Length=61847 Score E Sequences producing significant alignments: (Bits) Value seq410746 104 9e-18 seq136258 91.5 6e-14 >seq410746 Length=249 Score = 104 bits (114), Expect = 9e-18 Identities = 155/215 (72%), Gaps = 5/215 (2%) Strand=Plus/Plus Query 9999 TCTCGGCGCCGACCCGGAAACCCGCTACCTCCCGAGCGGCGACGCAATCTCCAACATCCG 10058 ||||||| ||| || |||||| ||| || | ||||| || | |||| ||| | Sbjct 1 TCTCGGCAACGATCCCGAAACCAAGTACACCCAGGGCGGCATGGCCGTGACCAAGATCAG 60 Query 10059 CCTCGCTACGACCGATCGCTA-CAAGGACAAGGCGAGCGGCGAGATGAAGGAATCGACCG 10117 ||| || || ||| | || ||||||| |||| |||| | | |||| |||| Sbjct 61 CCTGGCCACCACC-AGCGTGCGCAAGGACC--GCGA-CGGCAACACCCAGGAGCGCACCG 116 Query 10118 AATGGCACCGCGTCAGCTTCTTCGGCCGCCTCGCCGAGATCGTCGACGAGTACCTGCGCA 10177 |||||||||| || | |||||||||| |||| |||||||| || |||||||||||||| Sbjct 117 AATGGCACCGGGTGACCTTCTTCGGCAAGCTCGGCGAGATCGCCGGCGAGTACCTGCGCA 176 Query 10178 AGGGCGCGCCGGTCTACATCGAGGGCCGCATCCGC 10212 |||| ||| ||||||| | || || ||||||| Sbjct 177 AGGGTTCGCAGGTCTACGTGGAAGGTTCCATCCGC 211 >seq136258 Length=1331 Score = 91.5 bits (100), Expect = 6e-14 Identities = 201/297 (68%), Gaps = 6/297 (2%) Strand=Plus/Minus Query 9972 CGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCGCTACCTCCC 10031 ||| |||||||| || || ||||| ||||| || || |||||| || || | || Sbjct 346 CGTTAACAAAGTGATTCTTGTCGGGAATCTGGGTCAGGATCCGGAAGTACGTTATATGCC 287 Query 10032 GAGCGGCGACGCAATCTCCAACATCCGCCTCGCTACGACCGATCGCTACAAGGACAAGGC 10091 | || | ||| | ||||||| || |||||| | || ||| |||||| Sbjct 286 AAATGGTGGCGCTGTTGCCAACATTACGCTGGCTACGTCGGAAAGCTGGCGCGACAAGCA 227 Query 10092 GAGCGGCGAGATGAAGGA-ATCGACCGAATGGCACCGCGTCAGCTTC--TTCGGCCGCCT 10148 || ||| || | || || ||| || ||||||||||| || | ||| || ||| || Sbjct 226 GACCGGTGAAAACAAAGAGATC-ACTGAATGGCACCGTGT--GGTTCTGTTTGGCAAACT 170 Query 10149 CGCCGAGATCGTCGACGAGTACCTGCGCAAGGGCGCGCCGGTCTACATCGAGGGCCGCAT 10208 || || ||| | || |||||| || || ||| |||||| ||||| |||| | Sbjct 169 GGCTGAAGTCGCGGGTGAATACCTGAAAAAAGGGTCGCAGGTCTATATCGAAGGCCAGCT 110 Query 10209 CCGCACGCGGAAGTGGCAGGATAACGCCGGCCAGGATCGCTACACGACCGAGATCGT 10265 ||||| || || ||||||||| | | |||||||| || ||||| ||||| |||| Sbjct 109 GCGCACCCGTAAATGGCAGGATCAGGGTGGCCAGGAGCGTTACACCACCGAAGTCGT 53 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 196616258670018