Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq189152 129 5e-25 seq248630 111 1e-19 seq220070 109 4e-19 seq127763 109 4e-19 seq34210 105 5e-18 seq175940 93.3 3e-14 seq141175 91.5 1e-13 >seq189152 Length=79535 Score = 129 bits (142), Expect = 5e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||||||||| || || || ||||||||||| || | ||| | |||| || | ||| Sbjct 37343 TGAAGGGTAGACTCCTTCTGAATATTGTAATCTGCCAAAGTGCGCTCATCCTCGAGCTGC 37402 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| || | | ||| || || ||||| || ||||||||||| || || || Sbjct 37403 TTTCCAGCAAAGATGAGCCTCTGCTGGTCAGGCGGGATACCTTCTTTATCCTGGATCTTA 37462 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | ||||| || | || ||||||||||||| || || |||||| Sbjct 37463 GCCTTCACATTATCAATGGTGTCGGAGCTCTCAACTTCAAGAGTGATGGTCTTTCCGGTT 37522 Query 101447 AAAGTTTTTACAAATATCTGCATG 101470 | || || ||||||||||||||| Sbjct 37523 AGTGTCTTGACAAATATCTGCATG 37546 Score = 122 bits (134), Expect = 7e-23 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 |||||| || ||||||||||| || || ||||| || | || | |||| |||| ||| Sbjct 36886 ATGAAGAGTGGATTCTTTTTGGATGTTATAATCTGCCAAGGTACGCCCATCCTCCAGTTG 36945 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| |||||||| || | | ||| ||||| || |||||||| || || || || || || Sbjct 36946 CTTCCCTGCAAAGATAAGCCTCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTT 37005 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || ||| | || | ||||| || | ||||| |||||||||| || || || || Sbjct 37006 GGCCTTCACATTATCGATGGTGTCGGAGCTCTCCACCTCAAGAGTGATGGTCTTTCCTGT 37065 Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470 ||| || || ||||| ||||| ||| Sbjct 37066 TAATGTCTTGACAAAAATCTGTATG 37090 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| | || | ||| | || |||||||| || ||||| || ||||||||||| Sbjct 37775 CCACCTCTCAGGCGGAGAACAAGGTGGAGGGTAGACTCCTTTTGGATGTTGTAATCGGCC 37834 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | |||| || | ||||| || |||||||| | | |||||| || || ||| Sbjct 37835 AATGTCCGGCCATCCTCTAGCTGCTTGCCAGCAAATATGAGCCTCTGTTGGTCCGGAGGA 37894 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 ||||| || || || ||||| || ||| ||| | || | || || || | || || Sbjct 37895 ATGCCCTCCTTGTCCTGAATCTTGGCTTTAACATTGTCAATGGTATCTGAACTCTCGACC 37954 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||||| || ||||| || | || || ||||| |||||||| Sbjct 37955 TCAAGAGTGATAGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 38001 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || ||||| ||||| || || | ||||||||||| || | || | | || || Sbjct 37109 ACCAAGTGAAGAGTAGACTCCTTCTAGATATTGTAATCCGCCAACGTACGCCCGTCCTCG 37168 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || ||||| || | | ||| || || ||||| || ||||| ||||| || Sbjct 37169 AGCTGCTTTCCGGCAAAGATGAGCCTCTGCTGGTCAGGCGGGATACCTTCCTTATCCTGG 37228 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || ||| | || | |||||||| || || ||||| || | || || Sbjct 37229 ATCTTGGCCTTCACATTATCAATGGTGTCAGAGCCCTCAACCTCAAGTGTAATGGTCTTC 37288 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||||| ||||| ||||| |||||||| Sbjct 37289 CCGGTTAGCGTTTTGACAAAGATCTGCAT 37317 >seq248630 Length=92124 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || ||||| ||||| ||||| || || ||||||||||| || | |||| | || || Sbjct 18289 ACCAAATGGAGGGTGGATTCCTTCTGGATATTGTAATCAGCAAGTGTTCGCCCGTCCTCG 18348 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || ||||| || | ||||| ||||| || || || || || |||||||| Sbjct 18349 AGCTGCTTGCCAGCAAAGATGAGCCGCTGCTGATCTGGTGGGATTCCCTCCTTATCTTGT 18408 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || |||| || ||| | || | |||||||| | || || ||||| |||| || ||| Sbjct 18409 ATCTTTTCCTTGACATTGTCGATCGTGTCAGATGACTCAACCTCAAGTGTGATGGTCTTG 18468 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | | || | ||| |||||||| Sbjct 18469 CCAGTGAGGATCTTCATAAAGATCTGCAT 18497 Score = 107 bits (118), Expect = 2e-18 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| || || ||||| || ||||| || || |||||||| || | ||| | Sbjct 18054 ACGGAGAACCAAGTGGAGGGTGGACTCTTTCTGAATGTTGTAATCAGCAAGAGTGTGTCC 18113 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | |||||| || ||||||||||| ||||| || || || || ||||| || || Sbjct 18114 ATCCTCAAGTTGCTTGCCGGCAAATATCAACCGCTGCTGGTCTGGGGGGATGCCCTCCTT 18173 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||| || || ||| ||| | || | || || || | || || || || |||| Sbjct 18174 GTCTTGGATCTTCACTTTGACATTGTCAATCGTATCGGAAGACTCAACCTCGAGGGTGAT 18233 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || ||| |||| | || || ||||| || |||||| Sbjct 18234 GGTCTTGTCGGTGAGGGTCTTCACAAAGATTTGCATG 18270 >seq220070 Length=14372 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || || || || || ||||| || || | || ||| | || |||| ||| Sbjct 164 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCGTCCTCCAGCTGC 223 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || || | ||||| || || || || ||||| || || || || |||||| Sbjct 224 TTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATTTTT 283 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | |||||||||| ||||| ||||| |||| || ||||| || Sbjct 284 GCCTTGACGTTGTCAATGGTGTCAGACGACTCCACCTCAAGGGTGATGGTCTTGCCTGTC 343 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 || || || |||||||||||||| Sbjct 344 AATGTCTTCACAAATATCTGCAT 366 >seq127763 Length=95897 Score = 109 bits (120), Expect = 4e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||||||||| || || || || ||||| || || | || | | |||| || | ||| Sbjct 72879 TGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGCCAGGGTGCGGCCATCCTCAAGCTGC 72820 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| |||| |||||| || || || |||||||| || || || || || || Sbjct 72819 TTGCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTC 72760 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | ||||| || | ||||| || || |||| || |||||||| Sbjct 72759 GCCTTCACATTGTCAATGGTGTCCGAGGACTCCACCTCCAGGGTGATGGTCTTGCCGGTG 72700 Query 101447 AAAGTTTTTACAAATATCTGCATGGTTACGCGAAG 101481 | || || || || ||||||||| | | ||||| Sbjct 72699 AGCGTCTTGACGAAAATCTGCATGCCTCCACGAAG 72665 >seq34210 Length=56267 Score = 105 bits (116), Expect = 5e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| ||||| || || || || || ||||||||||| | || | | |||| || | || Sbjct 23080 ATGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGCAAGGGTGCGGCCATCCTCAAGCTG 23021 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || || || |||| ||||| || || ||||| ||||| || || || || || || Sbjct 23020 CTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTT 22961 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || || | || | ||||| || | ||||| ||||| |||| || |||||||| Sbjct 22960 GGCCTTGACGTTGTCGATGGTGTCGGAGGACTCCACCTCAAGTGTGATGGTCTTGCCGGT 22901 Query 101446 TAAAGTTTTTACAAATATCTGCATGGTTACGCGAAG 101481 | || || || || ||||||||| | ||||||| Sbjct 22900 GAGGGTCTTGACGAAGATCTGCATGCCTCCGCGAAG 22865 >seq175940 Length=99262 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || || || || || ||||| || |||| || | | | || || | ||| Sbjct 58126 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCAAGCTGC 58067 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| ||||| || | ||||| || || || || ||||| || || || || || || Sbjct 58066 TTACCAGCAAAGATGAGGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGGATCTTC 58007 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | ||||| || | || || ||||| |||| || |||||||| Sbjct 58006 GCCTTCACGTTGTCAATGGTGTCGGATGACTCGACCTCAAGCGTGATGGTCTTGCCGGTG 57947 Query 101447 AAAGTTTTTACAAATATCTGCATG 101470 | || || ||||||||||||||| Sbjct 57946 AGGGTCTTAACAAATATCTGCATG 57923 >seq141175 Length=38247 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || |||||||| || || || || || ||||| || || | || | | |||| || Sbjct 25907 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCA 25848 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || || | |||||| || || || || || || || || || || Sbjct 25847 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATACCCTCCTTGTCCTGG 25788 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || ||| | || | ||||| || | || || || || |||| || ||| Sbjct 25787 ATCTTGGCCTTCACATTATCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTG 25728 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||||| | || || ||||||||||||||| Sbjct 25727 CCGGTGAGGGTCTTCACAAATATCTGCATG 25698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 393867340791897