Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_018837.1 Length=122024 Score E Sequences producing significant alignments: (Bits) Value seq255299 96.9 3e-15 seq366053 95.1 9e-15 seq70204 86.0 5e-12 >seq255299 Length=12406 Score = 96.9 bits (106), Expect = 3e-15 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 39775 TTGGTACGCCCTACAGGATTCGAACCTGTAACCTACGAATTAGAACTACGTTGCTCTGTC 39834 ||||||||||||||||||||||||||||| ||||||| |||||| || |||||| || Sbjct 3293 TTGGTACGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGGTGCTCTATC 3352 Query 39835 CAATTGAGCTAAGAGCGC 39852 ||| ||||||||| |||| Sbjct 3353 CAACTGAGCTAAGGGCGC 3370 >seq366053 Length=223 Score = 95.1 bits (104), Expect = 9e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 39776 TGGTACGCCCTACAGGATTCGAACCTGTAACCTACGAATTAGAACTACGTTGCTCTGTCC 39835 |||||||||||||||||||||||||||| ||||||| |||||| || |||||| ||| Sbjct 223 TGGTACGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGGTGCTCTATCC 164 Query 39836 AATTGAGCTAAGAGCGC 39852 || ||||||||| |||| Sbjct 163 AACTGAGCTAAGGGCGC 147 >seq70204 Length=1350 Score = 86.0 bits (94), Expect = 5e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 39776 TGGTACGCCCTACAGGATTCGAACCTGTAACCTACGAATTAGAACTACGTTGCTCTGTCC 39835 |||||||||||| ||||||||||||| | ||||||| |||||| || |||||| ||| Sbjct 930 TGGTACGCCCTATAGGATTCGAACCTATGACCTACGGCTTAGAAGGCCGGTGCTCTATCC 989 Query 39836 AATTGAGCTAAGAGCGC 39852 || ||||||||| |||| Sbjct 990 AACTGAGCTAAGGGCGC 1006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 387976998526285