Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_018859.1 Length=77315 Score E Sequences producing significant alignments: (Bits) Value seq366053 91.5 7e-14 seq255299 91.5 7e-14 seq70204 84.2 1e-11 >seq366053 Length=223 Score = 91.5 bits (100), Expect = 7e-14 Identities = 69/80 (86%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 67610 TGGTGCACCCTACAGGATTCGAACCTGTAACCAACGACTTAGAAGGTCGCTGCTCTATCC 67669 |||| | ||||||||||||||||||||| ||| ||| ||||||||| || |||||||||| Sbjct 223 TGGTACGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGGTGCTCTATCC 164 Query 67670 -ATTGAGCTAAGGGTGCTTG 67688 | ||||||||||| || || Sbjct 163 AACTGAGCTAAGGGCGCATG 144 >seq255299 Length=12406 Score = 91.5 bits (100), Expect = 7e-14 Identities = 69/80 (86%), Gaps = 1/80 (1%) Strand=Plus/Plus Query 67610 TGGTGCACCCTACAGGATTCGAACCTGTAACCAACGACTTAGAAGGTCGCTGCTCTATCC 67669 |||| | ||||||||||||||||||||| ||| ||| ||||||||| || |||||||||| Sbjct 3294 TGGTACGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGGTGCTCTATCC 3353 Query 67670 -ATTGAGCTAAGGGTGCTTG 67688 | ||||||||||| || || Sbjct 3354 AACTGAGCTAAGGGCGCATG 3373 >seq70204 Length=1350 Score = 84.2 bits (92), Expect = 1e-11 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 67609 ATGGTGCACCCTACAGGATTCGAACCTGTAACCAACGACTTAGAAGGTCGCTGCTCTATC 67668 ||||| | ||||| ||||||||||||| | ||| ||| ||||||||| || ||||||||| Sbjct 929 ATGGTACGCCCTATAGGATTCGAACCTATGACCTACGGCTTAGAAGGCCGGTGCTCTATC 988 Query 67669 C-ATTGAGCTAAGGGTGC 67685 | | ||||||||||| || Sbjct 989 CAACTGAGCTAAGGGCGC 1006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 245778665722156