Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_019399.1 Length=167396 Score E Sequences producing significant alignments: (Bits) Value seq79071 201 1e-46 seq222524 178 1e-39 seq65234 165 9e-36 seq1462 149 7e-31 seq209331 136 4e-27 seq213894 125 8e-24 seq260686 98.7 1e-15 >seq79071 Length=852 Score = 201 bits (222), Expect = 1e-46 Identities = 155/184 (84%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 61398 TTACAAACTCTCGGTGAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGA 61457 ||| | ||| || || |||||||| | || |||||||||||||| || || ||||| || Sbjct 181 TTAAAGACTTTCAGTAAAGGTACGGGTAATTACGTCGCGCTGCTGCTCAGGCGTCAGTGA 240 Query 61458 GTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATG 61517 |||||| || || ||||| || || |||||||| |||||||||||||| ||||| ||||| Sbjct 241 GTTAAAACGCACGGCATAGCCTGAAACACGGATAGTCAGCTGCGGATAGTTTTCAGGATG 300 Query 61518 CTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCACC 61577 ||||||||||||||||| ||||| |||||||||||||| |||||||| || || ||||| Sbjct 301 TTTAACTGCATCTTCCAGCGTTTCGCGACGCAGAACGTTGACGTTCAGATGCTGTCCACC 360 Query 61578 TTCA 61581 |||| Sbjct 361 TTCA 364 >seq222524 Length=8439 Score = 178 bits (196), Expect = 1e-39 Identities = 145/176 (82%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 61405 CTCTCGGTGAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAG 61464 || || || |||||||| | || ||||| ||||||||||| || |||| ||||||||| Sbjct 4032 CTTTCAGTAAAGGTACGCGTAATCACGTCACGCTGCTGTTCTGGCGTCAAAGAGTTAAAA 4091 Query 61465 CGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACT 61524 || || ||||||||||| || || |||||||||||||||||||| ||||| ||||| || Sbjct 4092 CGCACGGCATAACCGGAAACGCGAATGGTCAGCTGCGGATATTTCTCCGGGTGCTTCACC 4151 Query 61525 GCATCTTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCACCTTC 61580 || |||||||| |||||||| | ||| ||||| |||||||| || ||||| || || Sbjct 4152 GCCTCTTCCAGCGTTTCACGGCTCAGGACGTTGACGTTCAGATGCTGACCGCCCTC 4207 >seq65234 Length=1614 Score = 165 bits (182), Expect = 9e-36 Identities = 310/453 (68%), Gaps = 12/453 (3%) Strand=Plus/Plus Query 138522 CATTAGGTCATTCAGTTGAACGCCATAATCCATATGACGGATACGGTTTTCTTCTACGCC 138581 ||||| | ||| | ||| || ||||||| | |||||| | | |||||||| | || Sbjct 649 CATTAATTTATTAATTTGTACAGCATAATCAAGATGACGTACTCTATTTTCTTCAATTCC 708 Query 138582 TTTGTTATTTTTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGC 138641 | | |||||||| ||||| | | |||||||| ||| | |||||| || || ||| || | Sbjct 709 TCTATTATTTTTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAAC 768 Query 138642 AGTAGCAGCGCCGCCACGAATTCCACCCTGTGAGCATGATTTAACTGCAGTCTGAAAATG 138701 ||| || || || || | || |||||| || || || ||||| ||||| | || || || Sbjct 769 AGTTGCGGCCCCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTG 828 Query 138702 TTTCCAAAAAGGAATAACACCAGTATGGCGTACTTCACCCATGCCAATCTTAGAACCTTC 138761 ||| ||||||||||| || ||||| | |||| || | | || | ||| Sbjct 829 TTTATAAAAAGGAATACATCCGGTATGAAATGCTTCTCCATTTCTGATAGGACTTCCTAA 888 Query 138762 AGCACGAATCATACCAACGTTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAAT 138821 ||| ||||| |||| ||||||| || ||||| || |||| ||| | ||||| ||||| Sbjct 889 AGCTCGAATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAAT 948 Query 138822 TG---AAGCGGAAGCCTTGTTGATAGACTTTAATGAATCACCTGC---CTCAATAACAAC 138875 || || | ||| || ||||| |||| ||| | |||| ||||| | || Sbjct 949 TGCACTAGTTGTAGC---ATTAATAGAGTTTA---AATTATCTGCACATTCAATTAACAC 1002 Query 138876 ACATGAACTAAACTGTCGAGTCGGAGTACGACAACCAGCCATAATAGGAGTTGGTAATGA 138935 ||| |||||||| || ||||| || || | || | |||||| || || |||| || Sbjct 1003 ACAAGAACTAAATTGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGGTAGAGA 1062 Query 138936 AATCTGTCGAGTAGATACTGCTTCATAAAAACG 138968 || | ||| || | ||| | |||||| || Sbjct 1063 TATTTTAAAAGTGGAAATTGCATTATAAAAGCG 1095 >seq1462 Length=4781 Score = 149 bits (164), Expect = 7e-31 Identities = 292/432 (68%), Gaps = 0/432 (0%) Strand=Plus/Minus Query 138537 TTGAACGCCATAATCCATATGACGGATACGGTTTTCTTCTACGCCTTTGTTATTTTTCAA 138596 ||| ||||| ||||| | ||||||| |||||| |||| || || ||||||||||| Sbjct 1431 TTGTACGCCGTAATCTAGGTGACGGACACGGTTACCTTCAACACCACGGTTATTTTTCAG 1372 Query 138597 AACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCC 138656 || | | |||||| |||||| ||||| ||||| ||| | || || || || || Sbjct 1371 GACTAATAAGCTTTCAATTTCCAAGTGCCACATAGGGTAAAACAGTGTCGCGGCACCCCC 1312 Query 138657 ACGAATTCCACCCTGTGAGCATGATTTAACTGCAGTCTGAAAATGTTTCCAAAAAGGAAT 138716 || | || || || ||||| ||||| || || ||||| || ||||| | || || || Sbjct 1311 GCGTACGCCGCCTTGCGAGCAAGATTTCACGGCCGTCTGGAAGTGTTTGTAGAACGGGAT 1252 Query 138717 AACACCAGTATGGCGTACTTCACCCATGCCAATCTTAGAACCTTCAGCACGAATCATACC 138776 | ||| |||||| ||||||| | || ||| |||||||| || Sbjct 1251 ACAACCGGTATGGAAAGCTTCACCACCACGGATTGGGCTGCCTAGCGCACGAATACGGCC 1192 Query 138777 AACGTTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAATTGAAGCGGAAGCCTT 138836 | | || ||||| || || ||||||| || | |||| ||| || | | |||| Sbjct 1191 AGCATTGATACCGATCCCTGCGCGTTGTGAAACGTATTTAACGATAGCACTAGAAGTGGC 1132 Query 138837 GTTGATAGACTTTAATGAATCACCTGCCTCAATAACAACACATGAACTAAACTGTCGAGT 138896 ||||||||| | ||| ||| || ||| |||| || ||||| || || || ||||| Sbjct 1131 GTTGATAGAGTCTAAGCTATCGCCACACTCGATAAGCACGCATGAGCTGAATTGGCGAGT 1072 Query 138897 CGGAGTACGACAACCAGCCATAATAGGAGTTGGTAATGAAATCTGTCGAGTAGATACTGC 138956 ||| || || |||||||| || || || ||||| ||||| | || || || || Sbjct 1071 CGGCGTCCGTACCCCAGCCATGATTGGCGTAGGTAAGGAAATTTTAAAGGTCGACACGGC 1012 Query 138957 TTCATAAAAACG 138968 |||||||| || Sbjct 1011 ATCATAAAAGCG 1000 >seq209331 Length=9407 Score = 136 bits (150), Expect = 4e-27 Identities = 132/170 (78%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 61411 GTGAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCGAACT 61470 |||||||| || | || || || |||||||||| |||||| ||||||||||| || Sbjct 316 GTGAAGGTTCGGGTAATCACATCCTGCTGCTGTTCTTTAGTCAGTGAGTTAAAGCGGACC 375 Query 61471 GCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATCT 61530 || |||||||| || || |||||||||||||||||||| || ||||| | | || || Sbjct 376 GCGTAACCGGAAACGCGAATGGTCAGCTGCGGATATTTCTCTGGATGTTCCATCGCGTCC 435 Query 61531 TCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCACCTTC 61580 ||| ||||||| || |||||||||||| ||||| ||||| ||||| Sbjct 436 AGCAGCATTTCACGGTTCATAACGTTAACGTTGAGGTGCTGACCGCCTTC 485 >seq213894 Length=28734 Score = 125 bits (138), Expect = 8e-24 Identities = 138/184 (75%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 61398 TTACAAACTCTCGGTGAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGA 61457 ||||| |||| ||||||||||| | ||| || || |||||||||| |||||| || Sbjct 8989 TTACATGCTCTGAGTGAAGGTACGGGTGATCACATCCTGCTGCTGTTCTTTAGTCAGCGA 8930 Query 61458 GTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATG 61517 ||| ||||| || ||||| || || || || ||||| | |||||||||||||||||| | Sbjct 8929 GTTGAAGCGTACCGCATAGCCCGACACGCGAATGGTTAACTGCGGATATTTTTCCGGGTC 8870 Query 61518 CTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCACC 61577 | | || || ||| ||||||| || ||||| ||||| ||||| ||||| || Sbjct 8869 TTCCATCGCTTCCAGCAGCATTTCACGGTTCATCACGTTGACGTTGAGGTGCTGACCCCC 8810 Query 61578 TTCA 61581 |||| Sbjct 8809 TTCA 8806 >seq260686 Length=13603 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 138532 TTCAGTTGAACGCCATAATCCATATGACGGATACGGTTTTCTTCTACGCCTTTGTTATTT 138591 ||||| || ||||| || ||||||||||| | ||||| |||| ||||| ||| || Sbjct 5584 TTCAGCTGCACGCCGTAGTCCATATGACGCACGCGGTTGCCTTCAACGCCGCGGTTGTTC 5525 Query 138592 TTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCG 138651 |||| || || || |||| ||||||| |||||| || || || | || || || Sbjct 5524 TTCAGCACCAGCAGGCTTTCCACTTCCAGATGCCACATTGGGTAGAACAGGGTCGCTGCA 5465 Query 138652 CCGCCACGAATTCCACCCTGTGAGCATGATTTAACTGCAGTCTGAAAATGTTTCCAAAAA 138711 ||||| || | || ||||| ||||| || || || || ||||| || || || | || Sbjct 5464 CCGCCGCGCACGCCGCCCTGAGAGCAGGACTTCACCGCGGTCTGGAAGTGCTTATAGAAC 5405 Query 138712 GGAATAACACCAGTATGGCGTACTTCACC 138740 ||||| || || ||| | ||||||| Sbjct 5404 GGAATGCAGCCGGTGTGGAATGCTTCACC 5376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532197294812960