Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq175410 91.5 3e-13 seq83182 89.7 9e-13 seq28753 89.7 9e-13 seq161155 84.2 4e-11 >seq175410 Length=55385 Score = 91.5 bits (100), Expect = 3e-13 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 132960 GATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCA 133019 || |||||||||||||| | |||||||||| ||||||||||| ||||||| |||||| Sbjct 21072 GACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCA 21013 Query 133020 AATCCCTCCCCCGCATCCAC 133039 ||||| |||||||| |||| Sbjct 21012 AATCCGGCCCCCGCAACCAC 20993 >seq83182 Length=1435 Score = 89.7 bits (98), Expect = 9e-13 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 132960 GATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCA 133019 || |||||||||||||| | |||||||||| ||||||||||| ||||||| |||||| Sbjct 1154 GACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCA 1213 Query 133020 AATCCCTCCCCCGCATCCA 133038 ||||| |||||||| ||| Sbjct 1214 AATCCGGCCCCCGCAACCA 1232 >seq28753 Length=2427 Score = 89.7 bits (98), Expect = 9e-13 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 132960 GATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCA 133019 || |||||||||||||| | |||||||||| ||||||||||| ||||||| |||||| Sbjct 2255 GACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCA 2196 Query 133020 AATCCCTCCCCCGCATCCA 133038 ||||| |||||||| ||| Sbjct 2195 AATCCGGCCCCCGCAACCA 2177 >seq161155 Length=716 Score = 84.2 bits (92), Expect = 4e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 132959 TGATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTC 133018 |||||||||||||||||||| || ||||||| ||||||||||| ||||||| ||||| Sbjct 67 TGATGCGGGGTGGAGCAGTCTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTC 8 Query 133019 AAATCC 133024 |||||| Sbjct 7 AAATCC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 890176582525320