Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_019452.1 Length=156628 Score E Sequences producing significant alignments: (Bits) Value seq89823 89.7 5e-13 seq302683 87.8 2e-12 seq266160 86.0 6e-12 seq163857 82.4 8e-11 seq140129 82.4 8e-11 >seq89823 Length=2041 Score = 89.7 bits (98), Expect = 5e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 136698 TGTAGTTCAGTCGGTAGAACGGTGGACTGTTAATCCATATGTCGCAGGTTCAAGTCCTGC 136757 |||||||||||||||||||||| ||||||||||||| |||||| | ||||| ||||| | Sbjct 499 TGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGT 558 Query 136758 CATCGTCGCCAAATTGAAGTAG 136779 || | |||||||| ||| || Sbjct 559 CAGAGGAGCCAAATTTAAGAAG 580 >seq302683 Length=202 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/178 (72%), Gaps = 5/178 (3%) Strand=Plus/Minus Query 83194 GCTGGA-CTTTCATTTTACTACCCAACATTTCAAAAACCTTACGATGTTTATCCAGTTCC 83252 |||||| ||||||| || | | ||| ||| || || || || || | | ||||||| Sbjct 176 GCTGGAACTTTCATCTTGCCAGCCAGATGTTCGAACACTTTGCGGTGCTCAACCAGTTCA 117 Query 83253 GGCTTCAGATATTCGTTGTAGAAACCACGAGTACCTTCAGGATTAGCACAGC--CTTCCA 83310 ||| || |||||||||||||| |||||| | || | ||||||| | |||| Sbjct 116 TTACGCAGGTACTCGTTGTAGAAACCGCGAGTAGAACCCGGCT--GCACAGCACCGTCCA 59 Query 83311 GGATGAAGAACACGTGCTTGTTGCCTGTCTGCTCGCCATCCCAATGGTTTGGTGAGTT 83368 | |||||||| ||||||||||| ||| || || ||||||||||| || ||||| Sbjct 58 GCATGAAGAAGTAATGCTTGTTGCCAGTCGCTTCCCCGTCCCAATGGTTCGGAGAGTT 1 >seq266160 Length=9069 Score = 86.0 bits (94), Expect = 6e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 136698 TGTAGTTCAGTCGGTAGAACGGTGGACTGTTAATCCATATGTCGCAGGTTCAAGTCCTGC 136757 |||||||||||||||||||||| ||||||||||||| |||||| | ||||| ||||| | Sbjct 374 TGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGT 315 Query 136758 CATCGTCGCCAAATT 136772 || | |||||||| Sbjct 314 CAGAGGAGCCAAATT 300 >seq163857 Length=4767 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 136698 TGTAGTTCAGTCGGTAGAACGGTGGACTGTTAATCCATATGTCGCAGGTTCAAGTCCTGC 136757 |||||||||||||||||||||| ||||||||||||| |||||| | ||||| ||||| | Sbjct 4438 TGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGT 4379 Query 136758 CATCGTCGCCAAATT 136772 || | |||| ||| Sbjct 4378 CAGAGGAGCCAGATT 4364 >seq140129 Length=10074 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 136698 TGTAGTTCAGTCGGTAGAACGGTGGACTGTTAATCCATATGTCGCAGGTTCAAGTCCTGC 136757 |||||||||||||||||||||| ||||||||||||| |||||| | ||||| ||||| | Sbjct 7966 TGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGT 8025 Query 136758 CATCGTCGCCAAATT 136772 || | |||| ||| Sbjct 8026 CAGAGGAGCCATATT 8040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 497954719282080