Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_019487.1 Length=143986 Score E Sequences producing significant alignments: (Bits) Value seq97837 116 3e-21 >seq97837 Length=15579 Score = 116 bits (128), Expect = 3e-21 Identities = 571/903 (63%), Gaps = 7/903 (1%) Strand=Plus/Plus Query 103521 TCTTAGAACGGTACGAAGACCGTGTTGTAATTGTAGCGCTTTTCTTTG---GAGATGGAG 103577 ||||||| || ||||||||||| || | || || | ||||| | | || | || Sbjct 7434 TCTTAGAGCGCTACGAAGACCGCGTCATGGCAGTTGCTTTGTTCTTGGCGCGTGAAGAAG 7493 Query 103578 ATGTTGAAAAGGCGTTAGCCTTTGTAGACACTATGATGAATCAAGAGTTTCAACCTGCTA 103637 ||| |||| || || | | | ||| | ||||| | ||||| | ||| || |||| Sbjct 7494 GTGTGCAAAAAGCCTTTGAATACGCAGAAATCATGATTAGCCAAGAATATCAGCCCGCTA 7553 Query 103638 CCCCTACGTTTTTAAACGCGGGACGTAAACGTAGAGGAGAGCTTGTAAGCTGTTTCTTAC 103697 | || || || | ||||| ||| ||| | || ||| | || ||||||||| Sbjct 7554 CGCCGACATTCCTGAACGCTGGAAAGAAAAGATCTGGCGAGTTAGTTTCTTGTTTCTTAG 7613 Query 103698 TAGAGGTGGGGGACTCTCTGAACGACATTGCGATGGCGGTCGAGACTGCTATGCAACTGT 103757 ||||| || ||| | |||| |||| ||| | || | || ||| | || | Sbjct 7614 ATGAGGTTGGCGACAACTTAAACGGAATTGGCTACGCGATTGACTCGGCAATGAAGCTAT 7673 Query 103758 CAAAAGTAGGCGGAGGCGTATCATTAAACCTTTCGAAAATCCGTTCTCAAGGAGAAGCCA 103817 | | || || || || ||||| ||| | || ||||||||| | | || ||||| | Sbjct 7674 CTTCTATCGGTGGTGGTGTGTCATTTAACATCTCCAAAATCCGTGCGCGTGGCGAAGCGA 7733 Query 103818 TCAAA-GAGATCAAGGGAGCTGCTAAAGGCGTTGTAGGGGTTATGAAACTTCTTGATAAC 103876 | ||| ||| | || || ||| ||| || | | | |||||| | | || | Sbjct 7734 TTAAAGGAGTAGATGGTCGC-GCTGGAGGTGTATTGCCGATCATGAAAATCATGGAAGAT 7792 Query 103877 GCCTTCCGTTATGCAGACCAGATGGGACAACGACAAGGCTCTGGTAGCGCGTATTTAAAT 103936 | ||| ||| || ||||| | || ||||| | ||| | ||| | ||||| || Sbjct 7793 ACGTTCTCTTACGCGAACCAGTTAGGGCAACGCCCAGGTGCAGGTGCGGTATATTTGAAC 7852 Query 103937 ATTTTTCACGCCGATATTAATGAGTTCCTCGATACAAAGAAAATATCTGCTGACGAGGAC 103996 ||||| ||| | |||||| | ||||| | ||| || || || ||| || ||| | Sbjct 7853 ATTTTCCACTCGGATATTGAAGAGTTTTTGGATTGTAAAAAGATCAATGCCGATGAGAAA 7912 Query 103997 GTGCGCGCTAAAACTTTGTCTATTGGTGTTGTAATTCCGGACAAGTTTATTGAACTCGCC 104056 ||||| ||| | | ||||||||| || | | || ||||| || || ||| | || Sbjct 7913 GTGCGTATCAAATCACTATCTATTGGTATTATCGTGCCCGACAAATTCATGGAATTGGCG 7972 Query 104057 CGGGAAGGTAAAGATGCGTATATTTTCCACCCAAGAACTGTGTATAAAGCGTATGGGGAA 104116 | ||| | ||| | ||| | || ||||| || ||| ||| |||||| || Sbjct 7973 GAGAAAGATGAAGCTTGCTATTTGATCTACCCACACACCGTGATGCAAGAGTATGGCAAA 8032 Query 104117 CACTTAGACGAATTAGACATTAACGAGAAATACGACGAGCTTGTAAACAA-CGAGTTAGT 104175 || ||||||| || || || | | | ||||||||| | | | ||| | | || | Sbjct 8033 TACCTAGACGAGTTGGATATGGATGCCATGTACGACGAGTTGATCACCAATCCAAATA-T 8091 Query 104176 CGAGAAAAAACGAATCAACCCACGTAAGCTACTAGAAAAACTTGCTGTACTTCGTATGGA 104235 | || || |||||| | || | ||| | | ||| |||| || | || Sbjct 8092 TAAAAAGAAGAAAATCAATGCGCGCCATCTATTGGTGAAAATTGCACAGACTCAAAAAGA 8151 Query 104236 GTCTGGATACCCGTATATTATGTTCCAAGATAACGTAAATAAAGTACATGCGTTAAACCC 104295 ||| ||||| || ||||| | | | |||| || | |||| || ||||| | ||| Sbjct 8152 GTCGGGATATCCATATATCTTCTACAAAGAAAATGCGAATAGAGCGCATGCTCTTAACGG 8211 Query 104296 TGTTAGTAAAGTTAAGTTCTCAAACTTATGTTCTGAGGTGTTACAAGCCTCTAAAGTATC 104355 | | || || || ||||| || | ||| | ||| | | |||| ||| ||||||| Sbjct 8212 CATCGGAAATGTAAAATTCTCGAATCTTTGTACCGAGATCATGCAAGTATCTGAAGTATC 8271 Query 104356 TGAGTACACTGACTATGGTAAAGAAGACAATATTGGTCTCGATATTTCTTGTAACCTTGG 104415 || || | |||||| || ||||| | ||| | || |||||||||||| || || Sbjct 8272 GGATATCAATATCTATGGCAAGGAAGATACCATTCGCTACGGTATTTCTTGTAATCTAGG 8331 Query 104416 ATC 104418 || Sbjct 8332 CTC 8334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 457752765357360