Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_019527.1 Length=43551 Score E Sequences producing significant alignments: (Bits) Value seq201909 109 2e-19 >seq201909 Length=21394 Score = 109 bits (120), Expect = 2e-19 Identities = 191/278 (69%), Gaps = 15/278 (5%) Strand=Plus/Minus Query 18770 ATTGACGCCGACTATGTGCTGCGCCGACTGGTCGAGATTGACCAAATGGACGTGCTGGAC 18829 ||||| || | |||||||| ||||| ||||| ||||||||| | ||||||||||| ||| Sbjct 2573 ATTGATGCTGCTTATGTGCTTCGCCGCCTGGTGGAGATTGACAAGATGGACGTGCTCGAC 2514 Query 18830 ATCCTGAAAGAGGATGGGGCACTCAAGCCGATCAGCGAGTGGCCAAAGTGCTGGCGAACC 18889 |||||| | |||| | || ||||| || | || ||||| || ||||||||| Sbjct 2513 ATCCTGCTTGCCAATGGCGAGCTGAAGCCAATTAAAGACTGGCCGAAAACATGGCGAACC 2454 Query 18890 ACATTGAGCGGGCTGGACATCAATACCACCGTCACCAATTACGACGATACCACCACAGAG 18949 || || ||| |||| | | ||| | || ||| | || | Sbjct 2453 ACTCTGTCCGGTATGGATGTAA------CCGAGATGGC---CGGTGATGC------AGCG 2409 Query 18950 AACATCCTCAAGAAGATCAAGTGGCCGGACAAGGTGAAGAACCTAGAGCTTATCGGCAAG 19009 | || ||||| ||||| ||||||||||||||||||||||| ||||| | || ||| Sbjct 2408 GGGCTGCTGAAGAAAATCAAATGGCCGGACAAGGTGAAGAACCTTGAGCTGCTTGGTAAG 2349 Query 19010 CATGTCCGCGTCGGGGCATTCAAAGAGCAACTTGATCA 19047 ||| || | || ||| || ||||||||| |||| || Sbjct 2348 CATATCAGTGTGCAGGCGTTTAAAGAGCAAATTGACCA 2311 Score = 98.7 bits (108), Expect = 3e-16 Identities = 114/154 (74%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 6739 ACTGACCCCACTGAATAGCCCCAGACACCTGAGCAAGGTGAAGCAAGCCCATGTAGCTGA 6798 |||| | ||||| ||||| || ||| |||||||| || | || |||||||||||||| Sbjct 19354 ACTGGCACCACTTGATAGCGCCTGACTGCTGAGCAATATGCATCAGGCCCATGTAGCTGA 19295 Query 6799 TGTCGAGATGCACACCTCCATCGCGAGGCACCAGGTAGGCAAGCTTGGCCGCCGGGTTCA 6858 |||||||| | | | || | | |||||||| || |||||||| ||| ||||| | Sbjct 19294 TGTCGAGACAAATAGCGCCTTTCCTTGGCACCAGATAAGCAAGCTTTTGCGCAGGGTTGA 19235 Query 6859 ACGTAATGCCAATGGCCGCCACGTTGATGATCGC 6892 ||| || |||||||| | | || |||||||| Sbjct 19234 GCGTGATCCCAATGGCAGAGATATTCATGATCGC 19201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138416141071826