Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_019529.1 Length=111506 Score E Sequences producing significant alignments: (Bits) Value seq498467 174 1e-38 seq70204 87.8 1e-12 seq149237 82.4 5e-11 >seq498467 Length=2746 Score = 174 bits (192), Expect = 1e-38 Identities = 228/313 (73%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 28562 GGAGTAACTGACAAAGGTTACTTAACAAACTCATTCCACTTAGACGTACTGAAGAAGGTA 28621 || || || ||||||||||||| || ||| |||||| | ||||| ||| ||||| Sbjct 703 GGCGTCACCGACAAAGGTTACTACACCAACAGCTTCCACCTCGACGTTGAGAAAAAGGTT 644 Query 28622 AACCCGTATGATAAAATCGACTTTGAAGCGCAAT-TCATCCCATACAGCTCCGGTGGTCA 28680 || ||||| || |||||||||||||||||| | || || || | | ||| ||| Sbjct 643 AATCCGTACGACAAAATCGACTTTGAAGCGGGCTATCCGCCGAT-CGCCAACGGCGGTTT 585 Query 28681 TATCTGCTACGGGGAATTCCCTAATATGCGCCACAATATTGAAGCACTCGAAAATGTGTG 28740 |||||||||||| || | ||| ||||| | || || | | ||||| || | || || Sbjct 584 TATCTGCTACGGCGAGTACCCGAATATCCAGCATAACCTGAAGGCACTGGAGGACGTCTG 525 Query 28741 GGATTACGCCTACACCAAAGTCCCATACTACGGCACCAACACACCAATTGATGAATGCTA 28800 ||||||| ||||| | || || || |||||||||||||| || |||||||||||||| Sbjct 524 GGATTACAGCTACAGCCGCGTGCCCTATTACGGCACCAACACCCCGATTGATGAATGCTA 465 Query 28801 TAGCTGCGGATTCAAAGGTGAGTTCAATTGTACAAGCAAAGGTTTTGAGTGTCCTAACTG 28860 ||||| || | ||||||||| || || |||||||| || || || ||||| Sbjct 464 CGAGTGCGGCTTTACGGGTGAGTTCGCCTGCACCAGCAAAGGCTTCACCTGCCCGAACTG 405 Query 28861 CGGAAACCACGAC 28873 ||| || |||||| Sbjct 404 CGGCAATCACGAC 392 >seq70204 Length=1350 Score = 87.8 bits (96), Expect = 1e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 45236 GCGCCCTTAGCTCAGCTGGATAGAGCACGTCCCTTCTAAGGATGTGGTCGTAGGTTCGAA 45295 ||||||||||||||| |||||||||||| ||||||||| |||| |||||||||| Sbjct 1006 GCGCCCTTAGCTCAGTTGGATAGAGCACCGGCCTTCTAAGCCGTAGGTCATAGGTTCGAA 947 Query 45296 TCCTACAGGGCGTGCCAT 45313 ||||| ||||||| |||| Sbjct 946 TCCTATAGGGCGTACCAT 929 >seq149237 Length=921 Score = 82.4 bits (90), Expect = 5e-11 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 38064 TAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGGTGGTCGGTGGTTCGAGTCCACCT 38123 ||||||||||||||||||||||||||| |||||||| ||||| ||||||||| ||| || Sbjct 168 TAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGAGGGTCGCTGGTTCGAGCCCAGCT 227 Score = 82.4 bits (90), Expect = 5e-11 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 38064 TAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGGTGGTCGGTGGTTCGAGTCCACCT 38123 ||||||||||||||||||||||||||| |||||||| ||||| ||||||||| ||| || Sbjct 458 TAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGAGGGTCGCTGGTTCGAGCCCAGCT 517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354524179978927