Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_019543.1 Length=160646 Score E Sequences producing significant alignments: (Bits) Value seq70204 91.5 2e-13 seq255299 84.2 2e-11 seq366053 82.4 8e-11 >seq70204 Length=1350 Score = 91.5 bits (100), Expect = 2e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 60942 CCCTATTGGATTCGAACCAATGACCCGCGGCTTAGAAGGCCGCTGCTCTATCCGACTGAG 61001 |||||| ||||||||||| |||||| ||||||||||||||| |||||||||| |||||| Sbjct 937 CCCTATAGGATTCGAACCTATGACCTACGGCTTAGAAGGCCGGTGCTCTATCCAACTGAG 996 Query 61002 CTAAG 61006 ||||| Sbjct 997 CTAAG 1001 >seq255299 Length=12406 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 60930 AATT-TTGGCAGTCCCTATTGGATTCGAACCAATGACCCGCGGCTTAGAAGGCCGCTGCT 60988 |||| |||| | ||||| ||||||||||| ||||| ||||||||||||||| |||| Sbjct 3288 AATTATTGGTACGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGGTGCT 3347 Query 60989 CTATCCGACTGAGCTAAG 61006 |||||| ||||||||||| Sbjct 3348 CTATCCAACTGAGCTAAG 3365 >seq366053 Length=223 Score = 82.4 bits (90), Expect = 8e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 60942 CCCTATTGGATTCGAACCAATGACCCGCGGCTTAGAAGGCCGCTGCTCTATCCGACTGAG 61001 ||||| ||||||||||| ||||| ||||||||||||||| |||||||||| |||||| Sbjct 216 CCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGGTGCTCTATCCAACTGAG 157 Query 61002 CTAAG 61006 ||||| Sbjct 156 CTAAG 152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510732084482960