Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_019909.1 Length=168809 Score E Sequences producing significant alignments: (Bits) Value seq1462 168 7e-37 seq260686 134 1e-26 seq65234 120 3e-22 seq161181 111 2e-19 seq286911 107 2e-18 seq189010 107 2e-18 seq462907 95.1 1e-14 >seq1462 Length=4781 Score = 168 bits (186), Expect = 7e-37 Identities = 340/497 (68%), Gaps = 12/497 (2%) Strand=Plus/Minus Query 146509 GGACTGAACAACGTGATGTAATCGTTTTTAATCAATCGTTCAATCATGAGGTCGTTAATT 146568 |||||||| | || ||| | || ||| | || |||| | |||||| | ||| ||| Sbjct 1490 GGACTGAATAGCGAGATATCGCCGCCTTTTACCAGACGTTGATACATGAGTTTGTTGATT 1431 Query 146569 TGAACACCATAATCTAGGTGGCGAATACGGTTTTCATCAACACCTTTATTGTTCTTCAGT 146628 || || || ||||||||||| || | |||||| | |||||||| || || ||||| Sbjct 1430 TGTACGCCGTAATCTAGGTGACGGACACGGTTACCTTCAACACCACGGTTATTTTTCAGG 1371 Query 146629 ACGAGCAGGTTTTCTACTTCAAGATGCCAAATCGGATAATACAAAGTAGCTGCACCGCCA 146688 || | | | |||| | ||| | ||||| || || ||| ||| || || ||||| || Sbjct 1370 ACTAATAAGCTTTCAATTTCCAAGTGCCACATAGGGTAAAACAGTGTCGCGGCACCCCCG 1311 Query 146689 CGAATGCCGCCTTGAGAACAAGATTTAACAGAAG-CT--AAGTGAGTTTTCCAGAATGGA 146745 || | ||||||||| || |||||||| || | | || ||||| ||| |||| || Sbjct 1310 CGTACGCCGCCTTGCGAGCAAGATTTCACGGCCGTCTGGAAGTG---TTTGTAGAACGGG 1254 Query 146746 ATAACGCCTGTATGACGAACTTCACCAGCGCCAATCTTAGAACCTTCAGCACG-ATACAT 146804 ||| || ||||| | |||||||| | | || ||| ||||| |||| Sbjct 1253 ATACAACCGGTATGGAAAGCTTCACCACCACGGATTGGGCTGCCTAGCGCACGAATAC-G 1195 Query 146805 TCCAGCATTAACACCAATACCGGCACGTTTGCTGATA--TATTTGATGATTGCTTTGTTT 146862 |||||||| | ||| || || || |||| ||| | ||||| | ||| || | Sbjct 1194 GCCAGCATTGATACCGATCCCTGCGCGTT--GTGAAACGTATTTAACGATAGCACTAGAA 1137 Query 146863 ACTGCGTTAATACTGTCAAGACTATCGCCACCTTCAATAACAACGCAAGAACTGAACTGG 146922 ||||| ||| ||| | |||||||||| || |||| ||||| || ||||| ||| Sbjct 1136 GTGGCGTTGATAGAGTCTAAGCTATCGCCACACTCGATAAGCACGCATGAGCTGAATTGG 1077 Query 146923 CGAGTCGGAGTACGTACACCGGCCATAATTGGAGTAGGCAGAGAAATCTGACGTTTAGAT 146982 |||||||| || ||||| || ||||| ||||| ||||| | ||||| | | | || Sbjct 1076 CGAGTCGGCGTCCGTACCCCAGCCATGATTGGCGTAGGTAAGGAAATTTTAAAGGTCGAC 1017 Query 146983 ACGGCATTATAGAAACG 146999 ||||||| ||| || || Sbjct 1016 ACGGCATCATAAAAGCG 1000 >seq260686 Length=13603 Score = 134 bits (148), Expect = 1e-26 Identities = 309/457 (68%), Gaps = 20/457 (4%) Strand=Plus/Minus Query 146553 CATGAGGTCGTTAATTTGAACACCATAATCTAGGTGGCGAATACGGTTTTCATCAACACC 146612 ||| || | ||| | || || || || || | || || | ||||| | ||||| || Sbjct 5594 CATCAGCTTGTTCAGCTGCACGCCGTAGTCCATATGACGCACGCGGTTGCCTTCAACGCC 5535 Query 146613 TTTATTGTTCTTCAGTACGAGCAGGTTTTCTACTTCAAGATGCCAAATCGGATAATACAA 146672 ||||||||||| || |||||| |||| ||||| |||||||| || || || ||| Sbjct 5534 GCGGTTGTTCTTCAGCACCAGCAGGCTTTCCACTTCCAGATGCCACATTGGGTAGAACAG 5475 Query 146673 AGTAGCTGCACCGCCACGAATGCCGCCTTGAGAACAAGATTTAACAGAAG-CT--AAGTG 146729 || ||||||||||| || | |||||| ||||| || || || || | | || ||||| Sbjct 5474 GGTCGCTGCACCGCCGCGCACGCCGCCCTGAGAGCAGGACTTCACCGCGGTCTGGAAGTG 5415 Query 146730 AGTTTTCCAGAATGGAATAACGCCTGTATGACGAA--CTTCACCAGCGCCAATCTTAGAA 146787 || |||| ||||| ||| || || ||| ||||||| ||| ||| Sbjct 5414 ---CTTATAGAACGGAATGCAGCCGGTGTG--GAATGCTTCACCGCCGCGGATCGGGCTG 5360 Query 146788 CCTTCAGCAC-GATACATTCCAGCATTAACACCAATACCGGCACGTTTGCTGATA----T 146842 || |||| ||| | || || |||| || |||||||||| ||||| | | Sbjct 5359 CCCAGCGCACGGATGC-GACCGGCGTTAATGCCGATACCGGCAC----GCTGAGAAACGT 5305 Query 146843 ATTTGATGATTGCTTTGTTTACTGCGTTAATACTGTCAAGACTATCGCCACCTTCAATAA 146902 | || | || || || |||||||| ||||| || ||||| | ||||| | Sbjct 5304 ACTTCACAATCGCGCTGGAGGTGGCGTTAATGGAATCAAGGCTGTCGCCGCACTCAATCA 5245 Query 146903 CAACGCAAGAACTGAACTGGCGAGTCGGAGTACGTACACCGGCCATAATTGGAGTAGGCA 146962 ||||| || ||||||||||| ||||| || || || |||| ||||||||| || |||| Sbjct 5244 GTACGCAGGAGCTGAACTGGCGCGTCGGGGTGCGCACGCCGGACATAATTGGCGTCGGCA 5185 Query 146963 GAGAAATCTGACGTTTAGATACGGCATTATAGAAACG 146999 | ||||||| | | || | |||| |||||||| Sbjct 5184 GCGAAATCTTAAAGGTGGAGATCGCATCGTAGAAACG 5148 >seq65234 Length=1614 Score = 120 bits (132), Expect = 3e-22 Identities = 305/460 (66%), Gaps = 8/460 (2%) Strand=Plus/Plus Query 146563 TTAATTTGAACACCATAATCTAGGTGGCGAATACGGTTTTCATCAACACCTTTATTGTTC 146622 |||||||| ||| ||||||| || || || | | ||||| |||| ||| |||| || Sbjct 659 TTAATTTGTACAGCATAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCTATTATTT 718 Query 146623 TTCAGTACGAGCAGGTTTTCTACTTCAAGATGCCAAATCGGATAATACAAAGTAGCTGCA 146682 || | || | | ||||| | ||| |||||||| || || ||| | | ||| || || Sbjct 719 TTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTTGCGGCC 778 Query 146683 CCGCCACGAATGCCGCCTTGAGAACAAGATTTAACAGAAGCTAAGTGAGT-TTTCCAGAA 146741 || || | || || ||||||||||||||||| || | ||| | ||| ||| | || Sbjct 779 CCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTG-CGCTTTGGAAGTGTTTATAAAA 837 Query 146742 TGGAATAACGCCTGTATGACGAACTTCACCAGCGCCAATCTTAGAACCTTCAGCACGATA 146801 |||||| || |||||| |||| ||| | || | ||| ||| ||| Sbjct 838 AGGAATACATCCGGTATGAAATGCTTCTCCATTTCTGATAGGACTTCCTAAAGCTCGA-- 895 Query 146802 CATT---CCAGCATTAACACCAATACCGGCACGTTTGCTGATATATTTGATGATTGCTTT 146858 ||| ||||| |||| || || || || |||| | |||||| | ||||| | Sbjct 896 -ATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAATTGCACT 954 Query 146859 GTTTACTGCGTTAATACTGTCAAGACTATCGCCACCTTCAATAACAACGCAAGAACTGAA 146918 || || |||||| || | | |||| ||| |||||| | || |||||||| || Sbjct 955 AGTTGTAGCATTAATAGAGTTTAAATTATCTGCACATTCAATTAACACACAAGAACTAAA 1014 Query 146919 CTGGCGAGTCGGAGTACGTACACCGGCCATAATTGGAGTAGGCAGAGAAATCTGACGTTT 146978 || ||||| || || | ||| || | |||||| || || || ||||| || | | | Sbjct 1015 TTGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGGTAGAGATATTTTAAAAGT 1074 Query 146979 AGATACGGCATTATAGAAACGGATAATATGCTTAAGACGA 147018 || | |||||||| || || ||||| || | |||| Sbjct 1075 GGAAATTGCATTATAAAAGCGCTGAATATAATTCATACGA 1114 >seq161181 Length=1368 Score = 111 bits (122), Expect = 2e-19 Identities = 179/252 (71%), Gaps = 4/252 (2%) Strand=Plus/Minus Query 68282 ATAATTTTCCCAGGCAAATTCTCGGAACCAGCCTGTTGTAATACTTGTGCACACTTTT-T 68340 |||||| | ||| ||| |||| |||||||| || |||| || || || || ||||| | Sbjct 680 ATAATTGTTCCAAGCATATTCACGGAACCAACCACTTGTGATGCTAGTACAAACTTTCAT 621 Query 68341 CAAGAGCCATTTTAAAGCT-TAACTCTGAACCAGGTTTAAAGTTATTAGGAATCTGCGAA 68399 |||| || | || ||| || |||| || | | ||||| |||| | ||||| || | Sbjct 620 CAAG-GCAAGTTCAAAACTATAACG-TGCAGCTGGTTTGAAGTCAAACGGAATTTGGCTA 563 Query 68400 CGCTCTAAAGCTAATACACATGCTTCTTCATATACGCCAGCTAACTGAATTTCTTTAGGT 68459 ||||| | ||| | |||||| | ||||||||| || ||| | |||| |||| | | Sbjct 562 CGCTCAAGAGCAAGTACACAAGTTTCTTCATAAACCCCAAACAGACGAATCTCTTCATCT 503 Query 68460 AGAGCCATGAACTTCTCTTTAGAAGTCATTACTTGAGAATCATCTTTCATGTAATATTTG 68519 | ||| | || || |||||| ||||| ||||| | ||||||||||||| | || Sbjct 502 ACAGCAAAAAATTTATCTTTACTGGTCATCACTTGTTCACCATCTTTCATGTAGAAAGTG 443 Query 68520 TATGCTGGCTGA 68531 ||||| || ||| Sbjct 442 TATGCAGGATGA 431 >seq286911 Length=6367 Score = 107 bits (118), Expect = 2e-18 Identities = 73/81 (90%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 74898 AATTTGGTGGCCCTTACTGGATTTGAACCAGTGACCAATCGATTATGAGTCGACTGCTCT 74957 ||||||||||||| | |||| |||||||||| |||||| ||||||||||||| ||||||| Sbjct 5711 AATTTGGTGGCCCCTGCTGGGTTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCT 5770 Query 74958 AACCATCTGAGCTAAAGGGCC 74978 ||||| ||||||||| ||||| Sbjct 5771 AACCA-CTGAGCTAAGGGGCC 5790 >seq189010 Length=996 Score = 107 bits (118), Expect = 2e-18 Identities = 81/93 (87%), Gaps = 2/93 (2%) Strand=Plus/Plus Query 74897 TAATTTGGTGGCCCTTACTGGATTTGAACCAGTGACCAATCGATTATGAGTCGACTGCTC 74956 || ||| |||||||| ||||||||||||||| |||||| ||||||||||||| |||||| Sbjct 769 TATTTTAATGGCCCTTGCTGGATTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTC 828 Query 74957 TAACCATCTGAGCTAAAGGGCC-TTTGTTTATG 74988 | |||| ||||||||||||||| | | |||||| Sbjct 829 TGACCA-CTGAGCTAAAGGGCCATATATTTATG 860 >seq462907 Length=336 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 74898 AATTTGGTGGCCCTTACTGGATTTGAACCAGTGACCAATCGATTATGAGTCGACTGCTCT 74957 ||| ||||||||| ||||| ||||||||| |||||| ||||||||||||| |||||| Sbjct 18 AATCTGGTGGCCCCAGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCGCGTGCTCT 77 Query 74958 AACCATCTGAGCTAAAGGGCCT 74979 ||||| |||||||| |||||| Sbjct 78 AACCAACTGAGCTATGGGGCCT 99 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 536690678842040