Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_020079.1 Length=147737 Score E Sequences producing significant alignments: (Bits) Value seq161193 122 8e-23 >seq161193 Length=8952 Score = 122 bits (134), Expect = 8e-23 Identities = 251/366 (69%), Gaps = 12/366 (3%) Strand=Plus/Plus Query 38135 TGTGCATTTGTATTCAAAGATAGCATCCATACTCAAAACTATAAAACCATGAGCCAAACC 38194 ||| ||||| || ||||| |||| |||||| |||| ||| ||||| || | ||| Sbjct 326 TGTACATTTATACTCAAAATCAGCAATGTCACTCAAGACTACAAATCCATGTGCGAGACC 385 Query 38195 AGGCGGAAGCCAAAACTGCGTATGGTGTCGTGCACGA--AGAACAACACCGTCCCAAGCA 38252 |||||| | ||||||||| | | || | | | || | || || ||| |||| Sbjct 386 AGGCGGCACCCAAAACTGTTTCTTGTTT--TCCTCGTTTAAAATAAAACCAGCCCATTTG 443 Query 38253 CCGTAAGTTGGACTATCTTTACGTAAATCTACAGCGAAATCCAATACTTCCCCACTTACA 38312 || | || ||| ||| | || ||||||||| | ||| || || || || |||||| Sbjct 444 CCAAACGTAGGAGAATCAGATCTTATATCTACAGCAACATCAAAAACCTCGCCTCTTACA 503 Query 38313 CAACGAACTAGCTTACCTTGCGGGTTATTTGTTTGAAAGTGCATTCCTCGCAAAACACCG 38372 ||||| || || |||||||| |||||| ||||||| |||| || ||||| ||| Sbjct 504 ACCCGAACAAGTTTTCCTTGCGGATTATTTTTTTGAAAATGCAGACCACGCAATACATTC 563 Query 38373 AAGTTTGATTTAGACATG-TTATCTTGAACGAAAGTTTGT----CTACCAATAATATCTT 38427 | | || || ||| ||||||||||| ||| | | || ||||| |||||| Sbjct 564 TTGGTAGAGCGGGA-ATGATTATCTTGAACAAAATCTAATGAAACTTTCAATA-TATCTT 621 Query 38428 CGTATTTTTGTTCATTATATGTTTCTAGAAAGAAACCACGATCATCTTTATAAACGTCTG 38487 ||||||||| | | | |||| || ||||| ||||| |||| ||| | |||| | || Sbjct 622 CGTATTTTTTCTTTTCAAATGTCTCAAGAAAAAAACCGCGATGATCGCCAAAAACCT-TG 680 Query 38488 GTTTGA 38493 | |||| Sbjct 681 GGTTGA 686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 469681062238520