Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq158632 132 3e-25 seq174195 125 5e-23 seq152054 118 7e-21 seq217758 111 1e-18 seq234489 98.7 6e-15 seq248630 96.9 2e-14 seq233010 96.9 2e-14 seq73823 96.9 2e-14 seq189152 93.3 3e-13 seq39020 89.7 3e-12 seq287177 87.8 1e-11 seq205139 87.8 1e-11 >seq158632 Length=4132 Score = 132 bits (146), Expect = 3e-25 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 474665 CAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTT-GGACA 474723 ||||||||| || || ||| ||||||||| |||| || || | ||| ||| | Sbjct 3818 CAAATTTCTGCAGAAGTGTTAAAAAAAATGAAAAAAACTGC-AGAAGACTACTTAGGAGA 3876 Query 474724 AGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGC 474783 | ||| | || ||||| ||||| ||||| || |||||||||||| |||| | ||||| Sbjct 3877 ATCAGTGAAAGAAGCAGTTATTACAGTTCCCGCCTATTTTAATGATGCTCAGAGACAAGC 3936 Query 474784 AACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAAC 474843 ||| |||||||| || ||||||||||| | | || | | |||||||| ||||| || Sbjct 3937 AACCAAAGATGCTGGTAGAATTGCAGGATTAGAAGTCAAAAGAATTATTAACGAACCTAC 3996 Query 474844 AGCAGCCGCACTTGCTTATGGTCTTGATAA 474873 ||| || ||||| ||||||||| | ||||| Sbjct 3997 AGCTGCAGCACTAGCTTATGGTTTAGATAA 4026 Score = 102 bits (112), Expect = 5e-16 Identities = 145/202 (72%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 290827 ACCATATGTTAATGAAGCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGACCTGC 290886 |||||| | || || || ||||| ||||| || ||||||||| || || | ||||| Sbjct 4018 ACCATAAGCTAGTGCTGCAGCTGTAGGTTCGTTAATAATTCTTTTGACTTCTAATCCTGC 3959 Query 290887 AATTTTTGCCGAATCTAAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGACTGT 290946 |||| | | | |||| ||||| || | || |||||||||||||| || || ||||| Sbjct 3958 AATTCTACCAGCATCTTTGGTTGCTTGTCTCTGAGCATCATTAAAATAGGCGGGAACTGT 3899 Query 290947 AATAACAGCtttttccact--ttctttttcaaataattttctgccatttgttttatttcT 291004 |||||| |||| || |||| |||| | || || | |||||| ||| ||| |||| | Sbjct 3898 AATAACTGCTTCTTTCACTGATTCTCCT--AAGTAGTCTTCTGCAGTTTTTTTCATTTTT 3841 Query 291005 ATAAGTATTTGTGCGCAAATTT 291026 | | | || ||| |||||| Sbjct 3840 TTTAACACTTCTGCAGAAATTT 3819 >seq174195 Length=20443 Score = 125 bits (138), Expect = 5e-23 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 474659 CCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTT 474718 ||| || |||||||| | ||| | || ||||||||| |||| || || || ||| Sbjct 9311 CCGCAAGAAATTTCTGCGATGATCTTGCAGAAAATGAAAAAAACGGC-AGAAGATTACTT 9369 Query 474719 -GGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACG 474777 |||||||||||| || |||||||||||||| ||||| || || || ||| | ||||| Sbjct 9370 AGGACAAGAAGTATCTCGCGCAGTAATTACTGTACCAGCGTACTTCAACGATGCACAACG 9429 Query 474778 TCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGA 474837 ||||||||| ||||| ||||| |||| |||||||| || ||||| || || || Sbjct 9430 TCAAGCAACGAAAGAAGCGGGTGAGGTTGCCGGTCTTAAAGTAGAGCGTATCATCAACGA 9489 Query 474838 ACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAA 474873 ||||| || || ||| | || || ||| | || || Sbjct 9490 GCCAACCGCTGCTGCATTAGCGTACGGTTTGGACAA 9525 >seq152054 Length=931 Score = 118 bits (130), Expect = 7e-21 Identities = 107/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 474739 AGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGG 474798 ||| ||||| ||||| || |||||||||||| |||| | ||||||||||| ||||| || Sbjct 1 AGTTATTACAGTTCCTGCCTATTTTAATGATGCTCAGAGACAAGCAACTAAGGATGCTGG 60 Query 474799 AAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGC 474858 ||||||||||| | | || | | |||||||| ||||| ||||| || || ||||| Sbjct 61 TAGAATTGCAGGATTAGAAGTCAAAAGAATTATTAACGAACCTACAGCTGCAGCGCTTGC 120 Query 474859 TTATGGTCTTGATAA 474873 ||||||| | ||||| Sbjct 121 TTATGGTTTAGATAA 135 >seq217758 Length=51541 Score = 111 bits (122), Expect = 1e-18 Identities = 167/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 474647 AAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGC- 474705 || || |||||| | ||| |||||||||| ||||| | ||| ||| | | ||| Sbjct 27053 AAGCAGTTTTCAGCTGAAGAAATTTCTTCCATGGTCCTCATCAAGATGCGTGAGATCGCT 26994 Query 474706 GAGCTCATATCTTGGAC-AAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTA 474764 ||| | || || ||| || | ||| |||| || | ||||| || || || || | Sbjct 26993 GAGG-CTTACCTAGGAGTAACTATTAAGA-ATGCCGTTGTCACTGTGCCTGCTTACTTCA 26936 Query 474765 ATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTAC 474824 ||||||| || | || ||||| || ||||| || ||||| ||||||||||| | | Sbjct 26935 ATGATTCCCAGAGGCAGGCAACCAAGGATGCTGGTGTTATTGCTGGTCTTAATGTGATGC 26876 Query 474825 GTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 |||| || || || ||||||||||| ||| |||| ||||||||||| ||||| Sbjct 26875 GTATCATCAACGAGCCAACAGCAGCTGCAATTGCCTATGGTCTTGACAAGAA 26824 >seq234489 Length=93356 Score = 98.7 bits (108), Expect = 6e-15 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || | ||||| || || || || ||||| ||||| | || || || || |||| Sbjct 49591 ATGCTGTTGTCACTGTCCCTGCCTACTTCAATGACTCTCAGAGGCAGGCCACCAAGGATG 49650 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | ||| |||||||| || |||||| | || ||||| || || ||||| || || || Sbjct 49651 CTGGAGTGATTGCAGGCCTGAATGTTATGCGCATTATCAACGAGCCAACTGCTGCTGCTA 49710 Query 474855 TTGCTTATGGTCTTGATAAGAA 474876 |||||||||||||||| ||||| Sbjct 49711 TTGCTTATGGTCTTGACAAGAA 49732 >seq248630 Length=92124 Score = 96.9 bits (106), Expect = 2e-14 Identities = 157/221 (71%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| || | || || || ||||| || || |||||||| ||||| Sbjct 18048 ACGGAGACGGAGAACCAAGTGGAGGGTGGACTCTTTCTGAATGTTGTAATCAGCAAGAGT 18107 Query 480611 TCTGTT-ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTC 480669 ||| ||| ||||||||||| || ||||| || | || || || || || || || | Sbjct 18108 G-TGTCCATCCTCAAGTTGCTTGCCGGCAAATATCAACCGCTGCTGGTCTGGGGGGATGC 18166 Query 480670 CTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCA 480728 | ||||||||||| ||||| ||||||| ||||| ||||| | | | || || Sbjct 18167 CCTCCTTGTCTTGGATCTTCACTTTGACATTGTCAATCGTATCGGAAGACTCAA-CCTCG 18225 Query 480729 AGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || || ||||||| ||||| || || ||||| Sbjct 18226 AGGGTGATGGTCTTGTCGGTGAGGGTCTTCACAAAGATTTG 18266 >seq233010 Length=85475 Score = 96.9 bits (106), Expect = 2e-14 Identities = 202/301 (67%), Gaps = 0/301 (0%) Strand=Plus/Plus Query 475872 ATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTA 475931 ||||||| ||| |||| || || ||||| || | ||| | || ||| | || ||| | | Sbjct 58398 ATATTGTGCTTCTTGATGTTACGCCACTGTCTCTTGGTTTGGAGACACTGGGTGGGGTGA 58457 Query 475932 TGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCA 475991 |||| || |||| || || || | |||| | || ||| | || ||||| | Sbjct 58458 TGACCAAGATTATCCCAAGGAACACAACCCTCCCTACCTCCAAGTCAGAGGTCTTTTCAA 58517 Query 475992 CTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCA 476051 | | ||||| || || | ||| || | | | |||| |||||| | || Sbjct 58518 CGGCTGCTGATGGACAGACTAGTGTGGAGATTAATGTTCTCCAAGGAGAAAGAGAGTTTG 58577 Query 476052 CTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAG 476111 || || ||||| ||||| | || | ||||| || |||||||||||||| | | Sbjct 58578 TTAGGGACAATAAATCCCTTGGTAGCTTCAGGCTTGATGGAATTCCTCCTGCTCCGCGTG 58637 Query 476112 GAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTG 476171 | ||||| ||||||||||| | |||||||||||||| || || ||||| |||| ||| Sbjct 58638 GTGTTCCCCAAATTGAAGTCAAGTTTGATATTGATGCCAACGGCATTCTGTCTGTTGCTG 58697 Query 476172 C 476172 | Sbjct 58698 C 58698 >seq73823 Length=2501 Score = 96.9 bits (106), Expect = 2e-14 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 474727 AGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAAC 474786 ||| ||||| || || || ||||| || ||||| || || ||| | |||||||||||||| Sbjct 653 AGTGACTGAAGCCGTTATCACTGTACCGGCATACTTCAACGATGCGCAACGTCAAGCAAC 712 Query 474787 TAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGC 474846 ||||||||| || | || ||||| | | ||| ||||| || || |||||||| || Sbjct 713 TAAAGATGCTGGCCGTATCGCAGGGTTAGAAGTTAAGCGTATCATCAACGAACCAACTGC 772 Query 474847 AGCCGCACTTGCTTATGG 474864 || || || || ||||| Sbjct 773 CGCAGCGCTGGCGTATGG 790 >seq189152 Length=79535 Score = 93.3 bits (102), Expect = 3e-13 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| ||||| || || ||||| ||| || || || ||| ||||| || | ||| Sbjct 37324 ACGAAGGCGGAGGACCAGGTGAAGGGTAGACTCCTTCTGAATATTGTAATCTGCCAAAGT 37383 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||| || || |||||||||||||| || || | || || ||||| || || || Sbjct 37384 GCGCTCATCCTCGAGCTGCTTTCCAGCAAAGATGAGCCTCTGCTGGTCAGGCGGGATACC 37443 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 ||| || || || ||||| || ||| ||||| || || | | | | || ||||| Sbjct 37444 TTCTTTATCCTGGATCTTAGCCTTCACATTATCAATGGTGTCGGAGCTCTCAA-CTTCAA 37502 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || || || ||||| || ||||| || || || || Sbjct 37503 GAGTGATGGTCTTTCCGGTTAGTGTCTTGACAAATATCTG 37542 >seq39020 Length=39705 Score = 89.7 bits (98), Expect = 3e-12 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| ||||| || || || || || || || | || || ||||| || || Sbjct 15815 ACGAAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGT 15874 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||| || || ||||| |||||||| || |||||||| || || ||||| || || Sbjct 15875 GCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCCGGAGGGATGCC 15934 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||||||||| || ||||| || ||| ||||| || || | | ||||| Sbjct 15935 TTCCTTGTCCTGGATCTTAGCCTTCACATTGTCAATTGTGTCCGAGGACTCGACCTCAAG 15994 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || |||||||| ||||| || ||||| || Sbjct 15995 TGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAAATCTG 16033 >seq287177 Length=89695 Score = 87.8 bits (96), Expect = 1e-11 Identities = 135/193 (70%), Gaps = 10/193 (5%) Strand=Plus/Minus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || | ||||| || ||||| || ||||| || || | || || || || |||| Sbjct 32978 ATGCTGTTGTCACTGTACCTGCATACTTCAATGACTCGCAGAGGCAGGCTACCAAGGATG 32919 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || ||||| || | ||||| | ||||| || || || |||||||| || || Sbjct 32918 CTGGTGTCATTGCTGGCATCAATGTCCTTCGTATCATCAACGAGCCAACAGCTGCTGCCA 32859 Query 474855 TTGCTTATGGTCTTGATAAGAATTCTGACA--------AAGAAGTAAATGTTTTAATCTT 474906 |||||||||||||||| ||||| || || ||||| ||||| | ||||| Sbjct 32858 TTGCTTATGGTCTTGACAAGAAGGCTTCCAGTGTTGGTGAGAAG--AATGTCCTCATCTT 32801 Query 474907 TGATTGTGGAGGT 474919 |||| ||||||| Sbjct 32800 TGATCTTGGAGGT 32788 >seq205139 Length=106759 Score = 87.8 bits (96), Expect = 1e-11 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 ||||| || ||||| || ||||| || || | || || || || ||||| || ||| Sbjct 88445 ACTGTACCTGCATACTTCAATGACTCGCAGAGGCAGGCTACCAAGGATGCTGGTGTCATT 88386 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || || | ||||| | ||||| || ||||| |||||||| || || ||||||||||| Sbjct 88385 GCTGGCATCAATGTCCTCCGTATCATCAATGAGCCAACAGCTGCTGCCATTGCTTATGGT 88326 Query 474866 CTTGATAAGAA 474876 ||||| ||||| Sbjct 88325 CTTGACAAGAA 88315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3246765189089708