Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_020205.1 Length=42963 Score E Sequences producing significant alignments: (Bits) Value seq410746 116 1e-21 seq20418 96.9 9e-16 >seq410746 Length=249 Score = 116 bits (128), Expect = 1e-21 Identities = 147/201 (73%), Gaps = 6/201 (3%) Strand=Plus/Minus Query 34903 GTACTTGCCGTAACGGATCATGCCCGCCACCGCGATCTTCGAACCCTTGCGCAAGTATTC 34962 ||||||| |||| ||||| || |||| || || |||||||||||||| ||| || Sbjct 223 GTACTTGTCGTAGCGGATGGAACCTTCCACGTAGACCTGCGAACCCTTGCGCAGGTACTC 164 Query 34963 GCCGGCAATCTCGGCCAGCTTCCCGAAGAACACCACCCGGTGCCACTGGGTTTCTTCGAC 35022 |||||| |||||| | ||||| |||||||| |||||||||||| | ||| | | Sbjct 163 GCCGGCGATCTCGCCGAGCTTGCCGAAGAAGGTCACCCGGTGCCATTCGGTGCGCT---C 107 Query 35023 CTG---GTTGCCCTCGCGGTCTTTCCGCTTCGACGTGGTGGCGATGGAAATGCGGGTGAT 35079 ||| |||||| |||||||| || ||| |||||||| | | || ||| | Sbjct 106 CTGGGTGTTGCCGTCGCGGTCCTTGCGCACGCTGGTGGTGGCCAGGCTGATCTTGGTCAC 47 Query 35080 GGCCATGCCGCCCTGCGTGTA 35100 ||||||||||||||| ||||| Sbjct 46 GGCCATGCCGCCCTGGGTGTA 26 >seq20418 Length=11049 Score = 96.9 bits (106), Expect = 9e-16 Identities = 199/293 (68%), Gaps = 5/293 (2%) Strand=Plus/Minus Query 34842 CCAGCATCTTCATCT-GATCGCAGGCGATGTCGGTGGTGTAGTGCGTCACGCCTTCCTTT 34900 ||| ||||| ||| | | |||| ||||||| || ||||| | | |||||| |||| Sbjct 7592 CCAACATCTGCATTTCGTTCGCCA-CGATGTCCGTCGTGTACTTCTCCACGCCGTCCTGA 7534 Query 34901 TCGT---ACTTGCCGTAACGGATCATGCCCGCCACCGCGATCTTCGAACCCTTGCGCAAG 34957 || ||||| |||| ||||| |||| | || || || ||| ||||| || | Sbjct 7533 CCGGTGAACTTGTCGTAGCGGATTTCGCCCTCGACGTAGACCTGCGAGCCCTTCTTCAGG 7474 Query 34958 TATTCGCCGGCAATCTCGGCCAGCTTCCCGAAGAACACCACCCGGTGCCACTGGGTTTCT 35017 || ||||| || ||||| || ||||||||||||||||| || |||||||| || || Sbjct 7473 TACTCGCCAGCGATCTCCGCGAGCTTCCCGAAGAACACGACTCGGTGCCATTGTGTGGAC 7414 Query 35018 TCGACCTGGTTGCCCTCGCGGTCTTTCCGCTTCGACGTGGTGGCGATGGAAATGCGGGTG 35077 |||| |||||| || ||| || ||| || || || | || || ||||| Sbjct 7413 TCGATGGCGTTGCCTTCTTTGTCCTTGCGCACGCTGGTAGTCGCCAGCGAGATTCGGGTA 7354 Query 35078 ATGGCCATGCCGCCCTGCGTGTAAGTCACCTTCGGGTCATCCCCCAGGTTCCC 35130 | || | ||| |||| ||||| || | |||||| | || || ||||| Sbjct 7353 ACCGCTGTTCCGGCCTGGGTGTACCTCGTGTCCGGGTCGTTGCCGAGATTCCC 7301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136545695665850