Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_020488.1 Length=38682 Score E Sequences producing significant alignments: (Bits) Value seq153502 109 1e-19 seq497144 96.9 9e-16 >seq153502 Length=4143 Score = 109 bits (120), Expect = 1e-19 Identities = 219/323 (68%), Gaps = 4/323 (1%) Strand=Plus/Plus Query 25784 ACAACAATCTCAGTAGTGTACTGATCTTGACCTTGCTGGTTCTGCCACTTGCGCGTGCGC 25843 ||||| | || || ||||| ||||||| || |||| ||||| |||||||| ||| Sbjct 1956 ACAACCACTTCGGTGGTGTAACGATCTTGGCCACCTTGGTCTTGCCATTTGCGCGTACGC 2015 Query 25844 AACTTGCCTTCAATGTAAAGCTTTGAGCCTTTGCGTGTGTACTCGCCGGCCACCTCTGCC 25903 | | ||||| || |||| || |||||||| || || ||||| || || ||||| Sbjct 2016 AGTTGACCTTCGATATAAACCTGAGAGCCTTTACGCAGATATTCGCCAGCAACTTCTGCT 2075 Query 25904 AACTTCCCGTATAACACAACACGGTGCCACTCTGTTTTTTCTACCGGCTGCCCTGTCTGC 25963 || || ||| | ||||||||||||||||| || || | ||| | || || ||| Sbjct 2076 AATTTACCGAACAACACAACACGGTGCCATTCAGTAATCTCTTTATTTTCACCGGTTTGC 2135 Query 25964 TTGTCTTTGTACTGCTCACTGGTGGCAATGCTTAAATTTGCCACGGCGGTACCGTTAGGC 26023 || || | ||| ||| || | | | |||| ||| || || || ||| Sbjct 2136 TTATCACGCCAGCTTTCAGAGGTTGCCAGTGTAATGTTTGTCACAGCCCCTCCATTTGGC 2195 Query 26024 ATATACCTAACTTCCGGGTCCTGGCCTAAGTTGCCGACAATGATTACCTTGTTAATTCCG 26083 ||||||| ||||| || || || || || || ||||||| || || ||||| | ||| Sbjct 2196 ATATACCGGACTTCTGGATCTTGACCCAAATTACCGACAAGAATCACTTTGTTTACGCCG 2255 Query 26084 CG---TGCCATTGCGCTC-CTCC 26102 || |||||||| ||| |||| Sbjct 2256 CGACTGGCCATTGCACTCTCTCC 2278 >seq497144 Length=1636 Score = 96.9 bits (106), Expect = 9e-16 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 25849 GCCTTCAATGTAAAGCTTTGAGCCTTTGCGTGTGTACTCGCCGGCCACCTCTGCCAACTT 25908 |||||| || |||| || |||||||| || ||| || |||||||| || |||| ||| Sbjct 1352 GCCTTCGATATAAACCTGAGAGCCTTTACGCAGGTATTCACCGGCCACTTCAGCCAGCTT 1293 Query 25909 CCCGTATAACACAACACGGTGCCACTCTGTTTTTTCTACCGGCTGCCCTGTCTGCTTGTC 25968 ||| | | |||||| |||||||| || ||||| ||| | | || ||||||||||| Sbjct 1292 GCCGAACAGCACAACGCGGTGCCATTCAGTTTTCTCTTTGGTTTCGCCGGTCTGCTTGTC 1233 Query 25969 TTTGTACTGCTCACTGGTGGCAATGCTTAAATTTGCCACGGCGGTACCGTTAGGCATATA 26028 | || ||| || | | | || || ||||| || || ||||| || Sbjct 1232 GCGCCAGGATTCGGAGGTAGCCAGAGTGATGTTGGCAACGGCACCGCCATTCGGCATGTA 1173 Query 26029 CCTAACTTCCGGGTCCTGGCCTAAGTTGCCGACAATGATTACCTTGTT 26076 | ||||||||||||||| || | || ||||| | ||||| ||||| Sbjct 1172 GCGAACTTCCGGGTCCTGCCCCAGATTTCCGACTAAAATTACTTTGTT 1125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122927707939688