Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_021299.1 Length=80955 Score E Sequences producing significant alignments: (Bits) Value seq261736 484 3e-132 seq226684 237 8e-58 >seq261736 Length=27266 Score = 484 bits (536), Expect = 3e-132 Identities = 679/947 (72%), Gaps = 12/947 (1%) Strand=Plus/Plus Query 59266 GCCATCAACTGGAACCGCGTCTTTGACGACAAGGATCTTGAGGTCTGGAACCGGTTGACC 59325 ||||||||||||||| | || ||||| || ||||| || || |||||||| ||||| Sbjct 9292 GCCATCAACTGGAACAACATCGAAGACGAGAAAGATCTGGAAGTGTGGAACCGCCTGACC 9351 Query 59326 AACAACTTCTGGCTGCCAGAGAAGATCCCTGTCTCCAACGACATCCCGGCCTGGGGCACG 59385 | ||||||||||||||| || ||| | || | || ||||| || ||||| ||| | | Sbjct 9352 AGCAACTTCTGGCTGCCGGAAAAGGTACCGCTGTCTAACGATATTCCGGCGTGGAACTCC 9411 Query 59386 CTGACGGAGGAAGAGCAAGTCCTCACGATGCGGGTCTTCACCGGCCTGACGATGCTCGAC 59445 |||| | || |||||| || || || || || ||||||||||||||| ||||||| Sbjct 9412 CTGAATGCCGATGAGCAACAGCTGACCATCCGCGTGTTCACCGGCCTGACGCTGCTCGAT 9471 Query 59446 ACGATCCAGGGCACCGTGGGTGCTGTGAGCCTGATCCCTGACGCGATCACGCCGCACGAG 59505 || |||||| |||| | || ||| | ||||| | || ||| | |||||||| || Sbjct 9472 ACCATCCAGAACACCCTCGGCGCTCCGGCGCTGATGGCCGATGCGCTGACGCCGCATGAA 9531 Query 59506 GAGGCGGTGTACACGAACATCGCGTTCATGGAGTCGGTGCACGCGAAGAGCTACAGCAAC 59565 ||||| ||| |||||||| || ||||| ||||||| || |||||| Sbjct 9532 GAGGCCGTGATGTCGAACATCAGCTTTATGGAAGCGGTGCATGCCCGCTCATACAGCTCG 9591 Query 59566 ATCTTCTCGACGCTGTGCTCGTCCAAGGAGATCGACGCGGCGTTCCGCTGGTCGGAGGAG 59625 |||||||| ||||||||| ||| || | || || || | | |||| || ||| Sbjct 9592 ATCTTCTCCACGCTGTGCCACACCAGCGATGTTGATGCCGCCTACGCCTGGAGCGAAGAG 9651 Query 59626 AATCCGAACCTGCAACGCAAGGCTCAGATCGTCCTGGACTACTACCAGGGTGACGATCCG 59685 ||||| ||||| |||||||| ||||| | ||| | ||||| | | |||| ||| Sbjct 9652 AATCCCCCGCTGCAGCGCAAGGCCGAGATCATTCTGCAGCACTACTACGAGAACGACCCG 9711 Query 59686 CTGAAGCGGAAGGTGGCCTCGACGTTGCTGGAGGGGTTCCTGTTCTACTCGGGCTTCTAC 59745 || ||| |||| | ||| ||| || || ||||||||||||||| ||||||||| Sbjct 9712 CTAAAGAAGAAGATCGCCAGCGTGTTCCTCGAATCGTTCCTGTTCTACTCCGGCTTCTAC 9771 Query 59746 CTGCCGATGTACTGGTCTAGTCGGGGGAAGCTGACGAACACGGCCGACATGATCCGGCTC 59805 ||||||||||||||||| || || || |||||||| ||||| ||||| ||||||| || Sbjct 9772 CTGCCGATGTACTGGTCGAGCCGCGGCAAGCTGACTAACACCGCCGATCTGATCCGTCTG 9831 Query 59806 ATCATTCGTGACGAGGCGGTGCACGGCTACTACATCGGATACAAGTTCCAGCGCGGCCTG 59865 || || || |||||||| ||||| ||||||||||| ||||||| ||| | |||| Sbjct 9832 ATTATCAAAGATGAGGCGGTTCACGGTTACTACATCGGCTACAAGTATCAGAAAGCCCTG 9891 Query 59866 GAGACTCAGAACGAGGCTCGCCGC-----GAGGAGCTGAAGGACTACACGTACGGTCTGC 59920 || | ||| || || ||| || ||||||||| | | | | | | |||| Sbjct 9892 GAAA--AAGA--GACGC-CGCAGCGTAAAGAGGAGCTGCAACAGTTCGCCGTTGAACTGC 9946 Query 59921 TACTCGAGTTGTACGACAACGAGATTGAGTACACGCAGGATCTGTACGACGGCGTGGGAC 59980 | || | | |||| || || || ||||| || || | | ||||||| ||||| || | Sbjct 9947 TGCTGGCGCTGTATGAAAATGAAATTGAATATACCGATGCGCTGTACGCAGGCGTCGG-C 10005 Query 59981 TGAC-TGAGGATGTCAAGATGTTCCTGCGCTACAACGCCAACAAGGCGCTGATGAATCTC 60039 || | || || || || | |||| ||| ||||| || ||||||||||||||||| ||| Sbjct 10006 TGGCAGGAAGAGGTGAAAAAGTTCTTGCATTACAATGCTAACAAGGCGCTGATGAACCTC 10065 Query 60040 GGCTACGAGGCGCTGTTCCCGCGCGACGAAACCGAGGTGAATGCGGCGATCTTGGCGGCA 60099 |||||||||||||||||||| || ||||| || || |||| ||| | |||| Sbjct 10066 GGCTACGAGGCGCTGTTCCCCTCTGAGATGACCGATGTTAACCCGGCTATCCTCTCGGCG 10125 Query 60100 CTGTCCCCTGGCGGGGACGAGAACCACGACTTCTTCTCGGGCTCTGGCAGCACGTATGTG 60159 ||||| || || || || ||||||||||||||||| ||||| ||| | | |||||| Sbjct 10126 CTGTCGCCAAACGCCGATGAAAACCACGACTTCTTCTCCGGCTCCGGCTCCTCCTATGTG 10185 Query 60160 ATTGGCAAGGCTGAGGTTACGGAAGACGAGGATTGGGACTTCTAGTC 60206 || || || || | | ||| ||||| || || ||| |||| || || Sbjct 10186 ATGGGTAAAGCGGTCGATACCGAAGATGAAGACTGGAACTTTTAATC 10232 >seq226684 Length=3079 Score = 237 bits (262), Expect = 8e-58 Identities = 364/515 (71%), Gaps = 8/515 (2%) Strand=Plus/Plus Query 59266 GCCATCAACTGGAACCGCGTCTTTGACGACAAGGATCTTGAGGTCTGGAACCGGTTGACC 59325 || || |||||||||||| | || ||||| |||||||| || ||||| || | ||| Sbjct 805 GCAATTAACTGGAACCGCATTCAGGATGACAAAGATCTTGAAGTGTGGAATCGTCTCACC 864 Query 59326 AACAACTTCTGGCTGCCAGAGAAGATCCCTGTCTCCAACGACATCCCGGCCTGGGGCACG 59385 | ||||||||||||||| ||||| | || |||||||||| | || | |||| ||| Sbjct 865 AGCAACTTCTGGCTGCCCGAGAAAGTGCCGCTCTCCAACGATCTGCCCGGCTGGCAGACG 924 Query 59386 CTGACGGAGGAAGAGCAAGTCCTCACGATGCGGGTCTTCACCGGCCTGACGATGCTCGAC 59445 ||| | || |||| || || || ||||| ||||||||||||||| |||||||| Sbjct 925 CTGGATAAACAACAGCAGCAGCTGACCATCCGGGTATTCACCGGCCTGACGCTGCTCGAC 984 Query 59446 ACGATCCAGGGCACCGTG---GGTGCTGTGAGCCTGATCCCTGACGCGATCACGCCGCAC 59502 || |||||| | |||| || || | | ||||| || || || || |||||| Sbjct 985 ACTATCCAG---AACGTGATCGGCGCGCCGGGGCTGATGGAAGATGCCATTACCCCGCAC 1041 Query 59503 GAGGAGGCGGTGTACACGAACATCGCGTTCATGGAGTCGGTGCACGCGAAGAGCTACAGC 59562 || ||||||||| |||| ||| || ||||| ||||||| || |||||| Sbjct 1042 GAAGAGGCGGTGCTGTCGAATATCAGCTTTATGGAAGCGGTGCATGCCCGCTCCTACAGT 1101 Query 59563 AACATCTTCTCGACGCTGTGCTCGTCCAAGGAGATCGACGCGGCGTTCCGCTGGTCGGAG 59622 |||||||| || ||||| || |||| | || || || | | ||| || Sbjct 1102 TCGATCTTCTCAACCCTGTGTAACACCCAGGATGTGGATGCAGCTTATCAGTGGAGCGAA 1161 Query 59623 GAGAATCCGAACCTGCAACGCAAGGCTCAGATCGTCCTGGACTACTACCAGGGTGACGAT 59682 |||||| || ||||| |||||| | ||| ||||||| ||||||||| || ||| Sbjct 1162 GAGAATGCGCCGCTGCAGAACAAGGCGCGCATCATCCTGGAACACTACCAGGCCGATGAT 1221 Query 59683 CCGCTGAAGCGGAAGGTGGCC-TCGACGTTGCTGGAGGGGTTCCTGTTCTACTCGGGCTT 59741 ||||||||| |||| | ||| || | || || ||| ||| ||||||| || ||||| Sbjct 1222 CCGCTGAAGAAGAAGATCGCCAGCGTC-TTCCTTGAGTCGTTTTTGTTCTATTCCGGCTT 1280 Query 59742 CTACCTGCCGATGTACTGGTCTAGTCGGGGGAAGC 59776 || ||||||||||||||||| || || || |||| Sbjct 1281 CTGGCTGCCGATGTACTGGTCGAGCCGTGGCAAGC 1315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 257355796308996