Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_021305.1 Length=76179 Score E Sequences producing significant alignments: (Bits) Value seq32733 145 4e-30 seq430283 86.0 3e-12 >seq32733 Length=979 Score = 145 bits (160), Expect = 4e-30 Identities = 212/296 (72%), Gaps = 13/296 (4%) Strand=Plus/Minus Query 66075 GCCGAGCTCGAAGGCGACATCGGGGAC-AG-TCACGTCGGCCTGCACGCGCGCCTCATGT 66132 ||||| |||||||||| || || ||| || | || |||||||| || ||||| ||| Sbjct 291 GCCGAAATCGAAGGCGAAATGGGTGACCAGCTGCCG--GGCCTGCAGGCCCGCCTGATGA 234 Query 66133 CGCAGGCCATGCGCAAGCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGG 66192 |||||| |||||||||| || |||| |||| || ||||||| ||| | ||| Sbjct 233 GCCAGGCCCTGCGCAAGCTGACCGGCAACATCAAGCGCTCCAACACCCTGGTGGTCTTCA 174 Query 66193 TCAACCAGTTGCGCGAGAAGATCGGCAACGTG------GGCTACGGCCCGAACGAGACCA 66246 |||||||| ||||| |||||||||| || ||| | ||||| | | ||||| Sbjct 173 TCAACCAGCTGCGCATGAAGATCGGCGTGATGATGCCGGGCCAGAGCCCGGAAGTGACCA 114 Query 66247 CCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCG 66306 || |||||||| || ||| |||||||||||| || ||| |||| ||||||| |||| Sbjct 113 CC---GGCGGCAACGCACTGAAGTTCTACGCCTCGGTGCGCCTGGACATCCGTCGTATCG 57 Query 66307 CCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTC 66362 | | ||| | ||||| ||| ||||||||| ||| | | ||||||||| Sbjct 56 GCGCGATCAAGAAGGGCGACGAGATCATCGGCAACCAGACCAAGATCAAGGTCGTC 1 >seq430283 Length=268 Score = 86.0 bits (94), Expect = 3e-12 Identities = 111/152 (73%), Gaps = 6/152 (4%) Strand=Plus/Plus Query 65868 CAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTA- 65926 ||||||||||| |||| ||| || | |||||| || |||||| | || ||||| | ||| Sbjct 16 CAGAAGGCCGGCGGCACCGCGGCGTTCATCGATGCCGAGCACGCGCTCGACCCGGTGTAT 75 Query 65927 --CGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGC 65984 ||||| |||||| || || |||| | || || | |||||||| || ||| Sbjct 76 GCGGCCAA---GCTCGGCGTCAACGTCGAGGATCTGCTGCTCAGCCAGCCGGATACCGGC 132 Query 65985 GAGCAGGCCCTGGAGATCGTTGACCTCCTCGT 66016 |||||||| |||||||||| ||| | || || Sbjct 133 GAGCAGGCGCTGGAGATCGCCGACATGCTGGT 164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242165583209340