Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_021331.1 Length=51821 Score E Sequences producing significant alignments: (Bits) Value seq79893 105 2e-18 seq75855 89.7 2e-13 >seq79893 Length=11432 Score = 105 bits (116), Expect = 2e-18 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 38179 GGTGGATACACTGGCGACGGCGGGAAGTATGAGCCAGCAGGTGTTGTTCATAAAGGCGAG 38238 |||||||| ||||| ||||| |||||||||||||| ||| || || ||| || ||| Sbjct 5058 GGTGGATATACTGGAGACGGTGGGAAGTATGAGCCCAAAGGCGTGGTGCATGGCGGTGAG 5117 Query 38239 TTTGTCATGACGAAGGAGGCCACGAAGCGGATCGGAGTTGGAAACCTTTACAAAATGATG 38298 ||||| | || || ||||| || |||| ||||| || |||||||||| |||||| Sbjct 5118 TTTGTTTTCACCAAAGAGGCGACCCAGCGTATCGGCGTCAAAAACCTTTACGGCATGATG 5177 Query 38299 CGCGGTTATGCAAATGGCGGCGTTGT 38324 || ||||| || ||||||| |||| Sbjct 5178 CGGGGTTACGCTGATGGCGGGCTTGT 5203 >seq75855 Length=31220 Score = 89.7 bits (98), Expect = 2e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 38179 GGTGGATACACTGGCGACGGCGGGAAGTATGAGCCAGCAGGTGTTGTTCATAAAGGCGAG 38238 || || ||||| || | || || || | || || || ||| |||| |||||||| || Sbjct 8950 GGCGGCTACACCGGGCAGGGGGGCAAATTCGACCCGGCGGGTATTGTGCATAAAGGGGAA 9009 Query 38239 TTTGTCATGACGAAGGAGGCCACGAAGCGGATCGGAGTTGGAAACCTTTACAAAATGATG 38298 |||||| | || || || || || |||| ||||| || | |||||||||| | |||||| Sbjct 9010 TTTGTCTTCACCAAAGAAGCGACTGAGCGAATCGGCGTGGAAAACCTTTACGACATGATG 9069 Query 38299 CGCGGTTATGCAAATGGCGGCGTTGTTGG 38327 ||||| ||||| | || ||| | || || Sbjct 9070 CGCGGCTATGCCAGCGGTGGCCTCGTAGG 9098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164723255880366