Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_021339.1 Length=51077 Score E Sequences producing significant alignments: (Bits) Value seq110996 145 2e-30 seq35213 95.1 4e-15 >seq110996 Length=37877 Score = 145 bits (160), Expect = 2e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 40250 GAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAAGCGCTCGAAGAT 40309 |||||||| ||| | |||||||| || || || || ||||| ||||| || ||||| | Sbjct 7073 GAAGTCGACGTCAAAGTCGGGCATCGAAACACGTTCCGGGTTGAGGAAACGTTCGAACAG 7132 Query 40310 GAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACC 40369 || | ||||||||||||||||||||| || || ||||||| ||||| ||||| Sbjct 7133 CAGGTCAAACTCCAGCGGGTCGAGGTCGGTAATTTTCAGTGCGTAGGCCACCAGAGAACC 7192 Query 40370 GGCCGCAGAGCCCCGCCCAGGGCCGACCCAGACCCCGTTCTCCTTCGCCCAGCGGATGAA 40429 ||| | || || || || || || || || |||| ||||||| ||| ||||||| Sbjct 7193 GGCACCGGAACCACGTCCCGGCCCCACGGGCACGTCGTTATCCTTCGACCACTGGATGAA 7252 Query 40430 GTCCGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGATGATCATGT 40479 ||| |||| |||||||| |||||| ||||||||| |||||| || Sbjct 7253 TTCCATCACGATCAGGAAGTAGCCCGGGAAGCCCATCTGGTTGATCACGT 7302 >seq35213 Length=6026 Score = 95.1 bits (104), Expect = 4e-15 Identities = 153/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 40250 GAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAAGCGCTCGAAGAT 40309 |||||||| || | |||||||| || || || || || || ||||| || || || | Sbjct 1763 GAAGTCGACATCAAAGTCGGGCATCGAAACACGTTCTGGATTGAGGAACCGTTCAAATAG 1704 Query 40310 GAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACC 40369 | | || || |||||||| || ||||| || | ||||| |||| ||||| Sbjct 1703 CAAATCAAATTCTAGTGGGTCGAGATCAGTGATTTTCAGTGCATAGGCCACCAATGAACC 1644 Query 40370 GGCCGCAGAGCCCCGCCCAGGGCCGACCCAGACCCCGTTCTCCTTCGCCCAGCGGATGAA 40429 || | |||||||| |||||||| || || || || || || | ||| |||| || Sbjct 1643 TGCACCGGAGCCCCGGCCAGGGCCAACAGGTACGCCATTGTCTTTTGACCACTGGATAAA 1584 Query 40430 GTCCGCGACGACGAGGAAGTACGACGGGAACCCCATCTGG 40469 ||| |||| |||||||| |||||||||||||||| Sbjct 1583 TTCCATCACGATAAGGAAGTAACCCGGGAACCCCATCTGG 1544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162356569856478