Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_021343.1 Length=35430 Score E Sequences producing significant alignments: (Bits) Value seq248802 248 2e-61 >seq248802 Length=12257 Score = 248 bits (274), Expect = 2e-61 Identities = 771/1172 (66%), Gaps = 45/1172 (4%) Strand=Plus/Plus Query 25512 TATCACCACGGCGTAACCGTCGTCGAAGATAACACCGGCGTCCGTCCGATCACCACGATC 25571 ||||||||||||||| |||||| ||| || ||| ||| || ||||| | Sbjct 2081 TATCACCACGGCGTACGCGTCGTTGAAATCAATGACGGAACCCGCAGTATTTCCACGGTA 2140 Query 25572 TCGACGGCCGTTATCGGTGTCGTCTGTACCGGCGACGATGCCGACCCGATCACGTTCCCG 25631 || || | || |||| | ||||| || | | ||||| || | | | |||||| Sbjct 2141 TCCACCTCTATTGTCGGCATGGTCTGCACTGCAGCGGATGCTGATGCCACCGTATTCCCG 2200 Query 25632 CTGAACAAGCCGGTGCTGCTCACGAACGTGCAGGCCGCGCTCGGCAAGGCGGGCCGAAAG 25691 || |||| |||||||||| | || |||||||||| ||| | || || || || | Sbjct 2201 CTCAACACGCCGGTGCTGATTACCGACGTGCAGGCGGCGGTGGGGAAAGCCGGTGTCAGC 2260 Query 25692 GGCACGCTGTACACGACGCTCGATGCGATCCAGAAACAG-GCCCGCCCGTACACCGTCGT 25750 ||||||||| | |||| | ||||| | ||| || ||| ||| || || || Sbjct 2261 GGCACGCTGGCGAAAGCGCTGCAGGCGATTGCCGACCAGAGCAAGCCGGTA-ACGGTGGT 2319 Query 25751 GGTGCGCGTCCCGCAAGGCAAGGATTCGGCGGAAACCACGTCGAA---CATTGTCGGCAC 25807 ||||||||| | | || | || |||| |||||| || ||| | ||||| Sbjct 2320 GGTGCGCGTTGAGGAGGGTGAAGACGAAGCGGCAACCACCAGCAATATCATCGGCGGCAG 2379 Query 25808 CGTGAATGCCGACGGCACGAAAACCGGGCTCAAGGCGCTCGAATCGGCGCCGTCCGTGGT 25867 || |||| ||||| | |||||| | || ||||| |||||| | ||| | Sbjct 2380 CG---ATGCTAACGGCCGCTACACCGGGATGAAAGCGCTGCTCGCGGCGCAGACCGACCT 2436 Query 25868 GCAGGTGAAGCCGCGGATTCTGGCGGTTCCGGGGCTCGATACGCAGCCCGTCGCGAACGC 25927 || |||||||| ||||| | || |||||||| ||| ||| | || || | ||| Sbjct 2437 TGGCGTTAAGCCGCGTATTCTCGGCGTGCCGGGGCTGGATTCGCTGGAAGTGGCCACCGC 2496 Query 25928 GCTGGCATCCACCGGGCAACTGCTGCGTGCGATGGCGTACGTCGCGGCTCGCAACGAGAC 25987 |||||| | | | | || | |||||| || | | || || ||||| | | | Sbjct 2497 GCTGGCGGCAATCTGCCAGCAGCTGCGCGCCTTCGGCTATATCTCGGCTTAC-----GGC 2551 Query 25988 GGGGGAACTGGTCGCCACGCAGGAAGAGGCGGTGGCCTACCGGAAGAAGTTCGGTCAACG 26047 | ||| ||| | || || ||| | || || | || ||| | || || Sbjct 2552 TGTAAAAC-GGT----AAGC-----GATGCGCTCAAGTATCGCGAAAACTTCAGCCAGCG 2601 Query 26048 CGAAGTGATGGTGATCTGGCCGGATTTCGTCGCATGGGACGACGCCGCGTCGAAAGAGGT 26107 ||| |||||||||||||||| || || ||||| ||| || ||| | | | | || Sbjct 2602 CGAGCTGATGGTGATCTGGCCCGACTTTGTCGCCTGGAACA---CCGTGACCAGCGCGGC 2658 Query 26108 TGAAG-TGCCC--GCCGTAGCGTATGCGGTCGGCCTGCGCGCGAAGATCGATCAACAAAC 26164 ||| |||| ||| || || ||||||||||||| || |||||| | | | Sbjct 2659 GGAAACTGCCTATGCCACCGCCCGCGCCCTCGGCCTGCGCGCCAAAATCGATAACGACAG 2718 Query 26165 CGGCTGGCATAAGACGCTCTCGAACGTCGCTGTGAATGGCGTCGAAGGGA---TCAGCAA 26221 |||||||||||| || || |||||||||| || || ||||| || || || || Sbjct 2719 CGGCTGGCATAAAACCCTGTCGAACGTCGGCGTCAACGGCGT-GACCGGCGTTTCCGCCT 2777 Query 26222 GCCGGTTTCGTGGGATTTGCAGAACCCGGCGACCGATGCGGGTTTCCTCAACGAGAATCA 26281 |||| | ||||| ||||| | || ||||||||| | | | || || || | || Sbjct 2778 --CGGTATTCTGGGACCTGCAGCAGGTGGGGACCGATGCCGATCTGCTGAATGA-AGCCA 2834 Query 26282 G-GTCACGACGCTGATCAACCGGAACGGCTTCCGATTCTGGGGCTCGCGCACGGCGTCCG 26340 | ||||| ||||||||| | |||| ||||| ||||||||| ||||| || Sbjct 2835 GCGTCACCACGCTGATCCGCAAAGACGGTTTCCGCTTCTGGGGCAACCGCACCTGTAGCG 2894 Query 26341 ACGATCCGCTGTTCGCGTTCGAAAACTACACGCGCACGGCGCAGGTGCTGGCCGATACGA 26400 | || ||||||||||| || ||||||| ||| ||| ||||||||||| | ||||| || | Sbjct 2895 ATGACCCGCTGTTCGCCTTTGAAAACTTCACCCGCTCGGCGCAGGTGATCGCCGACACCA 2954 Query 26401 TGGCCGAAGCACAGATGGTCGTTATCGACGGCGCGATGATTCCGGCGCTACCGCGCGACG 26460 ||||||| || || ||| | | |||| || ||| ||| |||| ||||||| Sbjct 2955 TGGCCGATGCGCATATGTGGGCCAACGACAAGCCGCTGACGCCGACGCTGGTGCGCGACA 3014 Query 26461 TGATCGAGGGCATCAACGCAAAAATGCGTGAAATGAAAACCAAGGGCCAGTTGATCGGCG 26520 | |||| || |||||||| || | ||||| ||| | | || | || | |||| Sbjct 3015 TTATCGCCGGGATCAACGCCAAGTTCCGTGAGCTGATCAACGCCGGTTATCTGCTGGGCG 3074 Query 26521 GC-TCGGCGTGGTTCGACGCGGAACAG--AACGGCGTTGTGGCGCTGAAAGATGGCAAAG 26577 | | || |||| ||| || || | ||| || | | ||||||| ||| ||| Sbjct 3075 CCAACTGC-TGGTACGA--CGAAAGCGCCAACAGCCAGGAGAGCCTGAAAGCCGGC-AAG 3130 Query 26578 CGGT-GATCAATTACGACTACACGCCGGTGCCCCCGCTGGAAAACCTCACGCTGCGCCAG 26636 | || ||| | |||||||| || |||||||| ||||||||| | || || ||||| ||| Sbjct 3131 CTGTATATCGACTACGACTATACCCCGGTGCCGCCGCTGGAAGATCTGACCCTGCGTCAG 3190 Query 26637 AAGATCACCGACCAGTATCTGGCCGATTTCGC 26668 || |||||| || ||||| | ||||| Sbjct 3191 CGCATTACCGACAGCTACCTGGCGAACTTCGC 3222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 112582999673984