Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_021781.2 Length=135281 Score E Sequences producing significant alignments: (Bits) Value seq46653 185 7e-42 seq481313 140 3e-28 seq342286 84.2 2e-11 >seq46653 Length=1539 Score = 185 bits (204), Expect = 7e-42 Identities = 602/929 (65%), Gaps = 6/929 (1%) Strand=Plus/Plus Query 99532 TATCCGTCTTTCTATCGAGCTTACAAAGAGTTAACTACAAATTACTGGTTGCCTGATGAG 99591 || ||||| |||||||| || ||||| || | | || || | |||| | || || ||| Sbjct 3 TACCCGTCGTTCTATCGCGCCTACAAGGAACTCTCGACCAACTTCTGGATTCCGGACGAG 62 Query 99592 GTAGATATGAAGAGCGATGCCAAACAGTACAACCACTTATCCGAAGAAGAGAAGTATGCG 99651 || || |||||| |||| ||||| |||||| | | | || | |||||| | || Sbjct 63 GTCGACATGAAGGGCGACGCCAAGCAGTACGGCGAGCTCTCGGCGCGCGAGAAGAACGCC 122 Query 99652 TTTGACTCCATTATCGGACTTTTAGCTACACTTGACTCACCCCAAACACGTTTTATTTAT 99711 | |||||||| ||||| || | || || || || || || || || ||||| || || Sbjct 123 TACGACTCCATCATCGGCCTGCTCGCCACGCTGGATTCGCCGCAGACGCGTTTCATCTAC 182 Query 99712 AACATTGCAGAGTATGTCAGTGATGCCTCCGTTCATGCTATTACAGCTATCATTGCACAA 99771 ||| | || || || ||| || | ||| || || | | | || ||||| | || Sbjct 183 AACGTCGCCGAATACATCACCGACCCGGCCGCGCACGCCAATGCCGCGATCATCGGCCAG 242 Query 99772 CAAGAAGCTATTCATAATGAGAGTTATTCTTATGTACTTGCTTCTATTACTAACTTACAA 99831 || |||| || || || ||||| || || || || || || || || | | Sbjct 243 CAGGAAGTGATCCACAACGAGAGCTACAGCTACGTGCTGGCCTCGATCACCGGCCTGGCC 302 Query 99832 GAGCAGAATCGAGTATTTGAGGAAGCTAGAACACACCCTACGATTATTAAACGTAATGCA 99891 || ||||| || || || || || | || ||||| ||||| || || || Sbjct 303 GACCAGAACCGCGTGTTCGAACTCGCGCGCACGCACCCCACGATCATCGCGCGCAACCAG 362 Query 99892 CCTATTATGAAGTCTTATGACGATTTCATGAATAACAAAACACCTGAGAATATGGTAAAA 99951 || || |||| || || ||||| |||||| | || | | |||| || | Sbjct 363 CCGATCATGACCTCGTACGACGACTTCATGCGCGAGAAGTCCGCCGAGACGCTGATCCGC 422 Query 99952 GCTTTAGTACAGTCATCTATCTTAGAGGGTATTAATTTCTACAGCGGTTTTGCTTACTTC 100011 | | | ||||| || ||| | || || || || |||||| ||| || || |||||| Sbjct 423 TCGCTGATCCAGTCGTCGATCCTGGAAGGCATCAACTTCTACTCCGGCTTCGCCTACTTC 482 Query 100012 TACAACCTCGTTCGTCAAAACAAGATGACGGGGACAGGTAAAATCATTAGCTTCATTAAT 100071 |||||||| || || || ||| |||||| || || || || ||||| |||||||| || Sbjct 483 TACAACCTGGTCCGCCAGAACCGGATGACCGGCACCGGCAAGATCATCAGCTTCATCAAC 542 Query 100072 CGTGATGAATTAGCCCATTCGAAATTTATTTCTGAGCTAATTAGAGCTATTGTAGGGGAA 100131 || || || | || ||||| || || || || || || | || || | || || Sbjct 543 CGCGACGAGCTGGCGCATTCCAAGTTCATCAGCGAACTGATCCGCGCGATCATCGGCGAG 602 Query 100132 AACCCTGAACTACAAACAGATGAACTAAATGACTACGTGTACGCTTCTTTTAGACATGCC 100191 |||| || || || || || | || ||||| || | | || || || Sbjct 603 AACCAGAGCCTGCAGGGCGACGAGCTCACCGAGTACGTACACACCGCGTTCGAGCACGCG 662 Query 100192 GTAGAGCTAGAACAAGCG-TGGTCTAGTGAGGTACTACAAGGCATTGAAGGAATTGATGT 100250 | ||||| ||| | ||| ||| | |||||| || | ||||| || || || || || Sbjct 663 ATCGAGCTGGAA-ACGCGCTGGACGGCTGAGGTGCTCGACGGCATCGACGGCATCGACGT 721 Query 100251 GGAAGAAATGTTAGACTATGTAAAATATCGTGCTAATAAAATGTTAGGGATGTTAGG--T 100308 || || ||| | ||| || || || || || || || ||| || ||| | || | Sbjct 722 CGACGAGATGGTCCGCTACGTGAAGTACCGCGCCAACAAGATGGCCGGCATGCTCGGCAT 781 Query 100309 CTTCAACCAATGTATCAAGGTCACACAGAAAATTCTATGACATGGATTAAAGCTTACGCC 100368 | || | | | | | ||| || || || ||| | ||||| || || ||||| Sbjct 782 CGAGAAGCTCTACAGCGA-GTCGAAC-GAGAACGTGATGCCGTGGATCAAGGCGTACGCG 839 Query 100369 GATAACTTTACAGAAACAAAAACCGACTTTTTCGAAATGCGTAATTCTAGTTACAAGAAA 100428 || ||||| || || || || || ||||| ||||| ||||| ||| | ||||||||| Sbjct 840 GACAACTTCACCGAGACGAAGACGGACTTCTTCGAGATGCGGAATGCGTCTTACAAGAAG 899 Query 100429 ACAAATTTAGACAATGGGTTCGATGACTT 100457 || || | || || |||||||| ||||| Sbjct 900 ACGAACTCGGATAACGGGTTCGACGACTT 928 >seq481313 Length=471 Score = 140 bits (154), Expect = 3e-28 Identities = 305/454 (67%), Gaps = 2/454 (0%) Strand=Plus/Minus Query 99961 CAGTCATCTATCTTAGAGGGTATTAATTTCTACAGCGGTTTTGCTTACTTCTACAACCTC 100020 |||||||| ||| | || || || || ||||| ||| ||||| |||||||||||| | Sbjct 453 CAGTCATCCATCCTGGAAGGCATCAACTTCTATTCCGGCTTTGCGTACTTCTACAACATG 394 Query 100021 GTTCGTCAAAACAAGATGACGGGGACAGGTAAAATCATTAGCTTCATTAATCGTGATGAA 100080 || || || ||| ||||| || || || || ||||| |||||||| || || ||||| Sbjct 393 GTGCGGCAGAACCGCATGACCGGCACCGGCAAGATCATCAGCTTCATCAACCGCGATGAG 334 Query 100081 TTAGCCCATTCGAAATTTATTTCTGAGCTAATTAGAGCTATTGTAGGGGAAAACCCTGAA 100140 | |||||| | || || || || || || | || || | || || ||||| || Sbjct 333 CTGGCCCATACCAAGTTCATCAGCGAACTGATCCGCGCCATCATCGGCGAGAACCCGGAG 274 Query 100141 CTACAAACAGATGAACTAAATGACTACGTGTACGCTTCTTTTAGACATGCCGTAGAGCTA 100200 || || || | || || | | ||||||| | | | || ||||| | | ||| Sbjct 273 CTGCAGACCAACGAGCTGACCGCCTACGTGCATGAGGCCTTCGAGCATGCGATCGCGCTG 214 Query 100201 GAACAAGCGTGGTCTAGTGAGGTACTACAAGGCATTGAAGGAATTGATGTGGAAGAAATG 100260 ||| |||||| || || || | ||||| || || || || ||||| || ||| Sbjct 213 GAAATCCAGTGGTCGTCGGAAGTGCTCGATGGCATCGACGGCATCGACGTGGAGGAGATG 154 Query 100261 TTAGACTATGTAAAATATCGTGCTAATAAAATGTTAGGGATGTTAGGTCTTCAACCAATG 100320 | ||| || || || || || || || ||| || ||| | || | | | || Sbjct 153 GTGCGCTACGTGAAGTACCGCGCCAACAAGATGGCCGGCATGCTCGGCATCGAGCGCCTG 94 Query 100321 TATCAAGGTCA-CACAGAAAATTCTATGACATGGATTAAAGCTTACGCCGATAACTTTAC 100379 || || | || ||| || || ||| ||||||| || || |||||||| ||||| || Sbjct 93 TA-CAGCGACACCACCGACAACGTGATGCCATGGATCAAGGCCTACGCCGACAACTTCAC 35 Query 100380 AGAAACAAAAACCGACTTTTTCGAAATGCGTAAT 100413 || || || |||||||| ||||| ||||| ||| Sbjct 34 CGAGACCAAGACCGACTTCTTCGAGATGCGCAAT 1 >seq342286 Length=214 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 99908 ATGACGATTTCATGAATAACAAAACACCTGAGAATATGGTAAAAGCTTTAGTACAGTCAT 99967 |||||||||||||| | || || | || | || | || | || | ||||| | Sbjct 214 ATGACGATTTCATGCGCGAGAAGACTGCCGAAACCCTGCTGAAGTCGTTGATCCAGTCCT 155 Query 99968 CTATCTTAGAGGGTATTAATTTCTACAGCGGTTTTGCTTACTTCTACAACCTCGTTCGTC 100027 | ||| | || || || || ||||| |||||| || |||||||||||| | || || | Sbjct 154 CGATCCTGGAAGGCATCAACTTCTATTCCGGTTTCGCGTACTTCTACAACATGGTGCGGC 95 Query 100028 AAAACAAGATGACGGGGACAGGTAAAATCATTAGCTTCATTAATCGTGATGAATTAGCCC 100087 | ||| |||| || || || || ||||| |||||||| || |||||||| | |||| Sbjct 94 AGAACCGCATGAACGGCACCGGCAAGATCATCAGCTTCATCAACCGTGATGAGCTGGCCC 35 Query 100088 A 100088 | Sbjct 34 A 34 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430141289787202