Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_021782.1 Length=72098 Score E Sequences producing significant alignments: (Bits) Value seq13560 107 9e-19 seq255299 95.1 6e-15 seq30178 93.3 2e-14 seq366053 91.5 7e-14 seq404846 87.8 8e-13 seq287784 87.8 8e-13 seq70204 82.4 3e-11 >seq13560 Length=35075 Score = 107 bits (118), Expect = 9e-19 Identities = 192/278 (69%), Gaps = 2/278 (1%) Strand=Plus/Plus Query 7944 TGAACCATTTGAATTGAAACCAGGTGAAACCAAGTTAGTTGAAACTGGTTTGGCTATTCA 8003 |||| |||| | | |||| || |||| |||| | | || || || |||||||||| Sbjct 3557 TGAAGCATTCGTACTGAATCCGGGTGCCACCACGCTGGTACCCACCGGCCTGGCTATTCA 3616 Query 8004 TCTGGATGATG-TGAAGTATGCAGCAATGATTCTTCCTCGTTCAGGTCTGGGCCATAAGC 8062 | | | ||| |||| | || || |||| | || || || || || |||||||| | Sbjct 3617 TATCGCCGATCCTGAACTG-GCCGCGGTGATCTTGCCGCGCTCTGGCCTTGGCCATAAAC 3675 Query 8063 ATGGTGTAGTGCTTGGGAACCTTACTGGTCTGATTGATTCAGACTATCAGGGTGAACTTA 8122 | || || || || || || || ||| |||||||| || || |||||||| | || | Sbjct 3676 ACGGCGTGGTTCTGGGCAATCTGGTTGGCCTGATTGACTCTGATTATCAGGGGCAGCTGA 3735 Query 8123 TGGTAAGCCTCTGGAATCGCTCTACAGAGCCTTTTACTGTTAACCCTGGTGACCGTATTG 8182 |||| | ||||||| ||| || | |||||| | | ||||| || ||||| | Sbjct 3736 TGGTTTCCGTCTGGAACCGCGGGCAGGACTCCTTTACTATCGAGCCTGGCGAACGTATCG 3795 Query 8183 CTCAGATGGTAATCGTGCCTGTAATGCAGCCTGAGTTC 8220 |||||||||| ||||||| || | ||| |||| ||| Sbjct 3796 CTCAGATGGTGTTCGTGCCGGTGGTACAGGCTGAATTC 3833 >seq255299 Length=12406 Score = 95.1 bits (104), Expect = 6e-15 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 63031 CCTTAGCTCAGTTGGATAGAGCAGTAGCCTTCTAAGCTATTGGTCACTGGTTCGAATCCA 63090 ||||||||||||||||||||||| ||||||||||| | |||||| ||||||||||| Sbjct 3366 CCTTAGCTCAGTTGGATAGAGCACCGGCCTTCTAAGCCGTAGGTCACAGGTTCGAATCCT 3307 Query 63091 GTAGGGTGTACCAAT 63105 |||||| |||||||| Sbjct 3306 GTAGGGCGTACCAAT 3292 >seq30178 Length=30577 Score = 93.3 bits (102), Expect = 2e-14 Identities = 59/64 (92%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 63113 TGGTGAAATCGGTAGACACAAGGGATTTAAAATCCCTCGGCTTATAGCTGTACGAGTTCG 63172 ||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||| Sbjct 9064 TGGTGAAATCGGTAGACACAAGGGATTTAAAATCCCTCGGCTTATGGCTGTGTGGGTTCA 9005 Query 63173 AGTC 63176 |||| Sbjct 9004 AGTC 9001 >seq366053 Length=223 Score = 91.5 bits (100), Expect = 7e-14 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 63031 CCTTAGCTCAGTTGGATAGAGCAGTAGCCTTCTAAGCTATTGGTCACTGGTTCGAATCCA 63090 ||||||||||||||||||||||| ||||||||||| | |||||| ||||||||||| Sbjct 151 CCTTAGCTCAGTTGGATAGAGCACCGGCCTTCTAAGCCGTAGGTCACAGGTTCGAATCCT 210 Query 63091 GTAGGGTGTACCA 63103 |||||| |||||| Sbjct 211 GTAGGGCGTACCA 223 >seq404846 Length=244 Score = 87.8 bits (96), Expect = 8e-13 Identities = 61/68 (90%), Gaps = 1/68 (1%) Strand=Plus/Minus Query 63113 TGGTGAAATCGGTAGACACAAGGGATTTAAAATCCCTCGGCT-TATAGCTGTACGAGTTC 63171 |||||||||||||||||||||||||||||||||||||||||| || ||||| || |||| Sbjct 242 TGGTGAAATCGGTAGACACAAGGGATTTAAAATCCCTCGGCTGTAAGGCTGTGCGGGTTC 183 Query 63172 GAGTCTCG 63179 |||| || Sbjct 182 AAGTCCCG 175 >seq287784 Length=1247 Score = 87.8 bits (96), Expect = 8e-13 Identities = 61/68 (90%), Gaps = 1/68 (1%) Strand=Plus/Plus Query 63113 TGGTGAAATCGGTAGACACAAGGGATTTAAAATCCCTCGGCT-TATAGCTGTACGAGTTC 63171 |||||||||||||||||||||||||||||||||||||||||| || ||||| || |||| Sbjct 423 TGGTGAAATCGGTAGACACAAGGGATTTAAAATCCCTCGGCTGTAAGGCTGTGCGGGTTC 482 Query 63172 GAGTCTCG 63179 |||| || Sbjct 483 AAGTCCCG 490 >seq70204 Length=1350 Score = 82.4 bits (90), Expect = 3e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 63031 CCTTAGCTCAGTTGGATAGAGCAGTAGCCTTCTAAGCTATTGGTCACTGGTTCGAATCCA 63090 ||||||||||||||||||||||| ||||||||||| | ||||| ||||||||||| Sbjct 1002 CCTTAGCTCAGTTGGATAGAGCACCGGCCTTCTAAGCCGTAGGTCATAGGTTCGAATCCT 943 Query 63091 GTAGGGTGTACCA 63103 ||||| |||||| Sbjct 942 ATAGGGCGTACCA 930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 229185838724479