Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_021806.1 Length=100418 Score E Sequences producing significant alignments: (Bits) Value seq100707 82.4 5e-11 >seq100707 Length=788 Score = 82.4 bits (90), Expect = 5e-11 Identities = 127/182 (70%), Gaps = 12/182 (7%) Strand=Plus/Plus Query 96217 ACTTGTTTAATCATTTGAGCACCTAAGTTTTCAAATGGATCTTCTAAATGAATTTCTCTA 96276 |||| ||| | ||||||||| || | ||||||||| |||||||| | ||||| | | Sbjct 1 ACTTCTTTTACCATTTGAGCCCCCATGTTTTCAAACTTATCTTCTAGTTCGATTTCACGA 60 Query 96277 GCCACACTTACACCATCTTTAGTAATGATTGG------ATTATACTGGTCTAAACCTAGT 96330 || || ||| |||||||||||||| | || | | | | |||||| || Sbjct 61 GCTACTGATACTCCATCTTTAGTAATACTAGGTGCTCCAAAAGATTTATCTAAAACT--- 117 Query 96331 ATAACATTCTTACCTGATGGTCCTAGAGTTACTTTAACTGCATTAGCTAAAGCATCTACA 96390 ||||| ||||| |||||||| ||| || |||||||||| ||||| ||| ||| Sbjct 118 ---ACATTTCTACCTTTTGGTCCTAAAGTCACCTTAACTGCATCTGCTAATACATTTACT 174 Query 96391 CC 96392 || Sbjct 175 CC 176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 319258459114399