Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_021867.1 Length=46978 Score E Sequences producing significant alignments: (Bits) Value seq88046 188 2e-43 >seq88046 Length=10957 Score = 188 bits (208), Expect = 2e-43 Identities = 344/498 (69%), Gaps = 13/498 (3%) Strand=Plus/Minus Query 35344 GTGGTTGCTCACTTTCACTTAGTAATGGTATTTCTGCATTG---TACGGATT-CTTTGCT 35399 || || |||||||| ||||| ||||||| |||||| | | | |||| | ||||| | Sbjct 4574 GTAGTAGCTCACTTCCACTTGGTAATGGG--TTCTGCTTCGATCTTCGGAATGCTTTG-T 4518 Query 35400 GGTGTTTACCACTGGTTTCCAAAAATGTTCGGGCGTATGATGAATAAAAATTTAGGTTAT 35459 ||||| |||||||||| ||| || ||||| || ||||||||| | || ||| ||||| Sbjct 4517 GGTGTGTACCACTGGTATCCTAAGATGTTTGGCCGTATGATGGACGAACGTTTGGGTTAC 4458 Query 35460 ATTCACTTTTGGATTACTGCAATTTGTGCTTATGGTGTTTTCTATCCAATGCACTTTATA 35519 | ||||| ||||| || ||| ||||||| || |||| || ||||||||||| Sbjct 4457 TTACACTTCTGGATGACATTTATTGGTGCTTACCTAGTATTCTTCCCGATGCACTTTATG 4398 Query 35520 GGGATGGCTGGATTACCACGTCGTTACTACACAAATACTAACTTTCCATTATTTGATGAT 35579 || || | ||| | ||||||||||| ||| | || | |||||||| | || | Sbjct 4397 GGTATCGATGGCGTTCCACGTCGTTATTACTCTTTCACAGATTTTCCATTCATGGAAAAA 4338 Query 35580 TTAGCTGATGTGAATAAAGTAATTACTACTTTTGCTTTGATTGGAGCAGCTTTCCAATTG 35639 | | ||| || | | || ||| ||| | || ||| || | | Sbjct 4337 TGGGTGTCTGTTAACATCTTGATCACTTGGGCGGCTATCATCTCTGCA---TTGGCACAG 4281 Query 35640 GTA---TTTATGTGGAATTTCTTTACTAGTATTTTTTACGGaaaaaaaGCTGTGCAAAAT 35696 ||| || ||||||| |||||| || |||| | || ||| ||| || ||| Sbjct 4280 GTAGCTTTCTTGTGGAACTTCTTTGCTTCGATTTGGTTAGGCAAACGTGCTCCTCAGAAT 4221 Query 35697 CCATGGAGGTCTAATACTCTTGAGTGGACTACACCAGTGGAACATGTACATGGAAACTGG 35756 || |||| || |||||| | ||||||||||||||||| || ||| | || || |||||| Sbjct 4220 CCTTGGAATTCGAATACTTTGGAGTGGACTACACCAGTAGAGCATTTCCACGGTAACTGG 4161 Query 35757 CCAGGTGCTATCCCAGAAGTTTATAGATGGCCTTATGATTACAGTAAACCAGGGCATGAC 35816 ||||| | || || ||||| | | ||||| || |||||| ||| ||||| || ||| Sbjct 4160 CCAGGAGAGATTCCTGAAGTACACCGTTGGCCATACGATTACTCTAAGCCAGGTCACGAC 4101 Query 35817 GAAGATTTTGTTCCTCAA 35834 |||||||| |||||||| Sbjct 4100 GAAGATTTCATTCCTCAA 4083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149317529517880