Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq464173 251 1e-61 seq221073 96.9 6e-15 seq211009 96.9 6e-15 >seq464173 Length=341 Score = 251 bits (278), Expect = 1e-61 Identities = 239/304 (79%), Gaps = 6/304 (2%) Strand=Plus/Minus Query 35454 GTCACACCCGTCTGGCCCTGGTATTTACCGCCGCGATCCTTGTACGAGATTTCGCA---G 35510 || || || |||||||||||||| || ||||| || || ||||||| | ||||| | Sbjct 304 GTGACGCCGGTCTGGCCCTGGTACTTGCCGCCCCGGTCGCGGTACGAGGTCTCGCACACG 245 Query 35511 TCCTCGTCACT---CTCGAAAAACAGCATCTGCGCCACACCTTCGTTCGCGTACACACGC 35567 || ||| || || ||| |||| ||||||||| || |||||||| ||||| | ||| Sbjct 244 TCGTCGGCATCGGACTGGAAGAACAACATCTGCGCGACGCCTTCGTTGGCGTAGATACGT 185 Query 35568 GCCGGCAGGTTGGTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCC 35627 ||||||| || ||||||||||||||||| |||||||| ||||||||||| |||||| Sbjct 184 GCCGGCAACGGCGTCGTGTTGCTGAACTCCAGCGTCACATGCCCTTCCCACTCCGGTTCC 125 Query 35628 AGCGGCGTCACGTTGACGATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACC 35687 ||||| || |||||||||||||| || || ||||||||||||||||| || | || ||| Sbjct 124 AGCGGGGTGACGTTGACGATGATCCCGCAACGCGCGTAGGTGCTCTTGCCGAGGCAGACC 65 Query 35688 ACGAGGACGTTGCGCGGAATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTC 35747 || || || | ||||| ||||||||||| || ||||| || ||||| ||||| ||| Sbjct 64 ACCAGCACATCCCGCGGGATGCGGAAGTACTCCACCGTACGCGCCAGCGCGAACGAATTC 5 Query 35748 GGCG 35751 |||| Sbjct 4 GGCG 1 >seq221073 Length=5188 Score = 96.9 bits (106), Expect = 6e-15 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 120227 TGCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCGAT 120286 |||||| |||||||| |||||||||||||||||||||||||||||||| | ||||||| Sbjct 1301 TGCCGGCTTAGCTCAGTTGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGAT 1242 Query 120287 CCCTGATGCCGGCACCAT 120304 || | ||||||||||| Sbjct 1241 TCCGGTAGCCGGCACCAT 1224 >seq211009 Length=1233 Score = 96.9 bits (106), Expect = 6e-15 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 120227 TGCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCGAT 120286 |||||| |||||||| |||||||||||||||||||||||||||||||| | ||||||| Sbjct 373 TGCCGGCTTAGCTCAGTTGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGAT 314 Query 120287 CCCTGATGCCGGCACCAT 120304 || | ||||||||||| Sbjct 313 TCCGGTAGCCGGCACCAT 296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 820762862364840