Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_022323.1 Length=136910 Score E Sequences producing significant alignments: (Bits) Value seq185146 307 9e-79 >seq185146 Length=13167 Score = 307 bits (340), Expect = 9e-79 Identities = 273/341 (80%), Gaps = 3/341 (1%) Strand=Plus/Minus Query 133588 CCGTCATCACTTAGAAGATTACGAATTATTTCTAACCTATCCCTCATTAAGCCCAACCAA 133647 || || ||||| || | ||||||||| || || || | ||| | ||| | |||||| Sbjct 8430 CCATCTTCACTGAGTAAATTACGAATAATCTCCAAGCGATCACGCATCAGAGTTAACCAA 8371 Query 133648 ATGGAATGCTCCAGACTATCATCGTAGTGCTCAAAAGCCCTCCCGGTGTTGAATGGTGGG 133707 | || ||||| | | ||| ||||| |||||||| || || || ||||| | ||||| Sbjct 8370 AGTGAGTGCTCAACCCCATCGTCGTAATGCTCAAAGGCACTGCCCGTGTTATAGGGTGGA 8311 Query 133708 TCTATGTAAACACACTTCACTTTGCCTGCGTACTCTTGCTCTAGCGCCTTCAATGCTAAT 133767 || || |||||||||||||||||||||| || || |||||||| ||||||| || || Sbjct 8310 TCGATAAAAACACACTTCACTTTGCCTGCATATTCCTGCTCTAGTGCCTTCAGCGCCAAC 8251 Query 133768 AAGTTATCTCCAAAAATCAGCTTATTATCAAAAATATCGTTTTCGGTAACTCTCTGGCT- 133826 | ||| || |||||||| |||||||||||||||||||| |||||||| ||| | ||||| Sbjct 8250 AGGTTGTCGCCAAAAATAAGCTTATTATCAAAAATATCTTTTTCGGTGACTTTTTGGCTA 8191 Query 133827 --GTGGTAAGACTTACTCGAATCTTCTAACAAAATGTGCGGCTCTAATTTTTTGCGCTCG 133884 ||||||||||||| | |||||| || |||||| ||||||| | ||||||||||||| Sbjct 8190 GCAAGGTAAGACTTACTAGGATCTTCCAATAAAATGCGCGGCTCAAGTTTTTTGCGCTCG 8131 Query 133885 TTTTTACCTATCCAGGTAAGTTCTAATTTGGTTTTGCTCAT 133925 |||||||||||||| || ||||||||||||||||||||||| Sbjct 8130 TTTTTACCTATCCAAGTCAGTTCTAATTTGGTTTTGCTCAT 8090 Score = 143 bits (158), Expect = 2e-29 Identities = 198/274 (72%), Gaps = 15/274 (5%) Strand=Plus/Minus Query 132591 TTGTACTCTTTATTGATCAG-----------ACTTATCTTTCGCAATTAAGGTCGGGGCA 132639 ||||||||||| ||||||| |||| ||||| | ||||| | ||| ||| Sbjct 9345 TTGTACTCTTTGTTGATCACTTCCAAGCCGAACTTGTCTTTAACGATTAAAGACGGTGCA 9286 Query 132640 AGTTTGTAATAACGGAAGCCACCACCACCTTGCCAGTTTACAGACTTAGAAATACCACCT 132699 ||||||||||||||||| ||||| |||||||||||||| |||| ||||| | ||| ||| Sbjct 9285 AGTTTGTAATAACGGAAACCACCGCCACCTTGCCAGTTAACAGTTTTAGATACACCGCCT 9226 Query 132700 TGATCTTCCCCATCGATCACTTTTTCCAAGCGCGG-AATAATATGGGTATGGCAATG-AT 132757 |||||||| ||||| || ||||||| || || || || | || | | ||||| || Sbjct 9225 TGATCTTCACCATCAATGACTTTTTGTAACCGGGGTAACACTA-CATTGTCACAATGCAT 9167 Query 132758 CACCAATCTCGATGGAGATCCAACGTCTTTTCATCTTGTGAGCTACAGCGGCAGTAGTTC 132817 | || | ||| | ||||| || | |||||| |||||||| || | ||||| | Sbjct 9166 C-CCTAGCTCAACCATAATCCAGCGGCGCCCCATCTTATGAGCTACCGCACCTGTAGTGC 9108 Query 132818 CCGAACCACCGAATGAATCCAATACCAAATCACC 132851 | |||||| | || ||||| || || | ||||| Sbjct 9107 CAGAACCAGCAAAAGAATCTAAAACAATGTCACC 9074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 435250864869200