Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_022343.1 Length=159991 Score E Sequences producing significant alignments: (Bits) Value seq260686 122 9e-23 >seq260686 Length=13603 Score = 122 bits (134), Expect = 9e-23 Identities = 276/407 (68%), Gaps = 10/407 (2%) Strand=Plus/Plus Query 15050 CTTCCGACCCCCATCATGGCAGGCGTTCGTACTCCTACCCGTCAGTTCAGTTCATGCGTT 15109 || ||||| || || ||| | ||||| || || || || || |||||||| || ||||| Sbjct 5184 CTGCCGACGCCAATTATGTCCGGCGTGCGCACCCCGACGCGCCAGTTCAGCTCCTGCGTA 5243 Query 15110 CTGATCAAAACTGGCGACACGCTGGATTCCATCAACGCAACCGCCAAATCTATCGTAGAC 15169 ||||| | ||||||| || |||||||| ||||| ||| ||| | || || | Sbjct 5244 CTGATTGAGTGCGGCGACAGCCTTGATTCCATTAACGCCACCTCCAGCGCGATTGTGAAG 5303 Query 15170 TATGTGAGCAAGCGTGCTGGCATCGGATTTGACGTTGGTGCAATTCGCGGTATCGGCAGT 15229 || || ||||||| || ||||| || ||| ||| || || | | ||||| Sbjct 5304 TACGTTTCTCAGCGTGCCGGTATCGGCATTAACGCCGGTCGCATCCGTGCGCTGGGCAGC 5363 Query 15230 CCTATCCGGGGCGGAGAGATGGTCCACACTGGTCTGG-TTCCATTC-ATCA--AATATCT 15285 || ||||| ||||| || ||||||| || ||| |||| ||| || | | | | Sbjct 5364 CCGATCCGCGGCGGTGAAGCATTCCACACCGG-CTGCATTCCGTTCTATAAGCACTTCCA 5422 Query 15286 GACCGGGGCACTGAAGTCGTGCTCTCAGGGCGGTATTCGCGGTGGTGCTGCTA-CAGCTT 15344 ||||| || ||||||| |||||||||||||| | ||||| ||||| || | | || Sbjct 5423 GACCGCGG---TGAAGTCCTGCTCTCAGGGCGGCGTGCGCGGCGGTGCAGCGACCCTGTT 5479 Query 15345 ATATCCCGCTGTGGCATTACCAGTTCGACGATGTCGTTGTGTTGAAGAACAACCGTGGTA 15404 || ||| |||||||| | | || | | ||| ||||||||||||| || Sbjct 5480 CTA-CCCAATGTGGCATCTGGAAGTGGAAAGCCTGCTGGTGCTGAAGAACAACCGCGGCG 5538 Query 15405 CGGAAGAAAACCGCGAGCGCCGTATCGACTATGGTATTCAGATCAAC 15451 |||| ||||||| ||| | ||| ||||| || | ||| | ||| Sbjct 5539 TTGAAGGCAACCGCGTGCGTCATATGGACTACGGCGTGCAGCTGAAC 5585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 508649164073160