Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_022771.1 Length=156648 Score E Sequences producing significant alignments: (Bits) Value seq97837 113 4e-20 >seq97837 Length=15579 Score = 113 bits (124), Expect = 4e-20 Identities = 575/898 (64%), Gaps = 28/898 (3%) Strand=Plus/Plus Query 87660 CTTAACAACGAGATCATGATTCAGAAGGACGGCAAGTTCCAGTTTGAAAAGGACAAAGAA 87719 ||||||||||| |||||||| | | || | | |||| || | || ||||||||| Sbjct 7130 CTTAACAACGAAATCATGATCAAACATGATGACGAGTTTAGCTTACATAAAGACAAAGAA 7189 Query 87720 GCCGTTCATAGCT-ATTTTGTGGACTATGTGAATCAGAACACTGTGTTCTTCCACAACCT 87778 || || | |||| |||| | || ||||| || ||||||| |||||||| |||| || Sbjct 7190 GCGGTA-AGAGCTTATTTCTTAGAATATGTAAACAAGAACACCGTGTTCTTTTACAATCT 7248 Query 87779 TAAAGAGAAGCTTGACTACTTGATCGAAAACGAGTATTACGAAGAGGAGTTTTTATCTAA 87838 ||||| || | || ||| | || || ||| | |||||| || ||| |||| | Sbjct 7249 AAAAGAAAAAGTAGATTACCTAATAGAGAACAATTATTACATTGA----TTTCTATC--A 7302 Query 87839 ATACTCT---TTCGAGGATATCAAAGAGGTTTTCAAGCTGGCTTACAGTAAGAAGTTCCG 87895 | | | ||||| || || | | || | | | | || ||||| || || Sbjct 7303 GTGGTTTACCTTCGAAGAGATTCAGCAAGTATACGATTATGTATATGCAAAGAAATTTCG 7362 Query 87896 TTTCCCTTCATTCATGAGTGCATTTAAGTTTTATAATGACTACGCACTTAAA-ACAAATG 87954 ||||| || |||||| || || ||||||| | ||| || | | | | Sbjct 7363 TTTCCAGTCTTTCATGGCGGCTTTCAAGTTTTTCCAAAGCTATGCGTTGCGCGATGACTC 7422 Query 87955 ACAAGAAGAAGCTGCTT-GAGCGTTATGAGGACCGCATCTCTATCGTAGCTCTATTCTTT 88013 | ||| || | ||| ||||| || || |||||| || || ||| | ||||| Sbjct 7423 AGGCGAAAAA--TTCTTAGAGCGCTACGAAGACCGCGTCATGGCAGTTGCTTTGTTCTTG 7480 Query 88014 GCTGATGGGGACACTGAG----AAGGCTAAGCAGTACGTTGAAATGATGATCCAGCAGGA 88069 || || || || | ||| || | | |||| ||||| ||||| || || Sbjct 7481 GCGCGTGAAGAAGGTGTGCAAAAAGCCTTTGAA-TACGCAGAAATCATGATTAGCCAAGA 7539 Query 88070 CTACCAACCAAGTACACCTACATTCCTTAACGCAGGCAGAAAAAGACGTGGAGAACTTGT 88129 || || || ||| || |||||||| ||||| || | |||||| ||| || | || Sbjct 7540 ATATCAGCCCGCTACGCCGACATTCCTGAACGCTGGAAAGAAAAGATCTGGCGAGTTAGT 7599 Query 88130 CAGCTGCTTCCTCATGGAAGTCGGGGATTCTCTAAATGACATTTCTAAGGCTATTGATAT 88189 || ||| | || || || || |||| | ||| | || ||||| Sbjct 7600 TTCTTGTTTCTTAGATGAGGTTGGCGACAACTTAAACGGAATTGGCTACGCGATTGACTC 7659 Query 88190 GTCCATGCAGCTTTCTAAATTAGGCGGAGGGGTGTCATTAAACCTTTCTAAGCTCCGTGC 88249 | | ||| |||| ||| | || || || |||||||| ||| | || || ||||||| Sbjct 7660 GGCAATGAAGCTATCTTCTATCGGTGGTGGTGTGTCATTTAACATCTCCAAAATCCGTGC 7719 Query 88250 TAAGGGAGAAGCTATTAAAGGGGTAGAAAA-CGCTACTAAAGGTGTTGTAGGGGTAATGA 88308 || ||||| |||||||| ||||| ||| || |||||| | | | |||| Sbjct 7720 GCGTGGCGAAGCGATTAAAGGAGTAGATGGTCGCG-CTGGAGGTGTATTGCCGATCATGA 7778 Query 88309 AGCTCCTAGATAACGCATTCCGTTACGCAGACCAAATGGGGCAGCGCCAAGGGTCAGGTG 88368 | || | || | | ||| |||||| |||| | ||||| |||| ||| |||||| Sbjct 7779 AAATCATGGAAGATACGTTCTCTTACGCGAACCAGTTAGGGCAACGCCCAGGTGCAGGTG 7838 Query 88369 CGGCATATCTAAACATCTTCCACAGGGACATTAACGATTTCTTAGATACTAAGAAAATCT 88428 ||| |||| | ||||| |||||| ||| ||| | || || || ||| ||| || ||| Sbjct 7839 CGGTATATTTGAACATTTTCCACTCGGATATTGAAGAGTTTTTGGATTGTAAAAAGATCA 7898 Query 88429 CTGCGGACGAAGATGTACGTGTGAAGACGCTCTCTATCGGTGTAGTCATCCCTGATAAGT 88488 ||| || || | || ||| | || | || ||||| ||| | || | || || || | Sbjct 7899 ATGCCGATGAGAAAGTGCGTATCAAATCACTATCTATTGGTATTATCGTGCCCGACAAAT 7958 Query 88489 TCGTAGAGCTTGCACGAGAA-GAT-AAGGACG-TATTCGTGTTCTACCCACACACTGT 88543 || | || | || ||||| ||| ||| | |||| || ||||||||||||| || Sbjct 7959 TCATGGAATTGGCG-GAGAAAGATGAAGCTTGCTATT--TGATCTACCCACACACCGT 8013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498018319905280