Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_022988.1 Length=74210 Score E Sequences producing significant alignments: (Bits) Value seq32733 149 3e-31 seq228004 120 1e-22 seq430283 86.0 3e-12 >seq32733 Length=979 Score = 149 bits (164), Expect = 3e-31 Identities = 213/296 (72%), Gaps = 13/296 (4%) Strand=Plus/Minus Query 65016 GCCGAGCTCGAAGGCGACATCGGGGAC-AG-TCACGTCGGCCTGCACGCGCGCCTCATGT 65073 ||||| |||||||||| || || ||| || | || |||||||| || ||||| ||| Sbjct 291 GCCGAAATCGAAGGCGAAATGGGTGACCAGCTGCCG--GGCCTGCAGGCCCGCCTGATGA 234 Query 65074 CGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGG 65133 |||||| |||||||||| ||||||| |||| || ||||||| ||| | ||| Sbjct 233 GCCAGGCCCTGCGCAAGCTGACCGGCAACATCAAGCGCTCCAACACCCTGGTGGTCTTCA 174 Query 65134 TCAACCAGTTGCGCGAGAAGATCGGCAACGTG------GGCTACGGCCCGAATGAGACCA 65187 |||||||| ||||| |||||||||| || ||| | ||||| | | ||||| Sbjct 173 TCAACCAGCTGCGCATGAAGATCGGCGTGATGATGCCGGGCCAGAGCCCGGAAGTGACCA 114 Query 65188 CCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCG 65247 || |||||||| || ||| |||||||||||| || ||| |||| ||||||| |||| Sbjct 113 CC---GGCGGCAACGCACTGAAGTTCTACGCCTCGGTGCGCCTGGACATCCGTCGTATCG 57 Query 65248 CCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTC 65303 | | ||| | ||||| ||| ||||||||| ||| | | ||||||||| Sbjct 56 GCGCGATCAAGAAGGGCGACGAGATCATCGGCAACCAGACCAAGATCAAGGTCGTC 1 >seq228004 Length=3045 Score = 120 bits (132), Expect = 1e-22 Identities = 472/729 (65%), Gaps = 20/729 (3%) Strand=Plus/Plus Query 64733 GGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCA 64792 |||||| | || || |||||||| || || |||||||| || | || ||| ||| || Sbjct 313 GGGCCGTATCGTTGAGATCTACGGACCTGAGTCTTCAGGTAAAACCACGCTGACTCTGCA 372 Query 64793 CGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTC 64852 | | || ||| ||| ||| | | |||| ||||| || ||||| | Sbjct 373 GGTTATCGCATCTGCACAGCGTAAAGGTAAAACCTGTGCCTTTATCGATGCCGAGCATGC 432 Query 64853 CCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGT-TC 64911 || || || | ||||||||| ||||| || ||| | || ||||| | || | || Sbjct 433 GCTTGATCCGGTTTACGCCAAGAAACTCGGCGTAGACATTGATAACCTGCTC-TGCTCTC 491 Query 64912 AGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGC 64971 |||| |||||||| |||||||| ||||| ||| ||| || | ||||| | Sbjct 492 AGCCAGACACTGGTGAGCAGGCGCTGGAAATCTGTGATGCGCTGGCGCGCTCTGGTGCCG 551 Query 64972 TGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCG 65031 | | | || |||| ||||| || ||||| ||| ||| || || ||||||| | Sbjct 552 TTGACGTGATCATCGTCGACTCCGTCGCGGCGCTGACGCCTAAAGCGGAAATCGAAGGTG 611 Query 65032 ACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGC 65091 | ||||| ||| ||| | ||||| || || | ||| ||||| ||||| || | Sbjct 612 AAATCGGTGACTCACACATGGGCCTCGCGGCACGTATGATGAGCCAGGCGATGCGTAAAC 671 Query 65092 TCACCGGCACCATCTCCAGCA--CCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGA 65149 | |||| | | || |||| |||| || ||| | | | |||||||| | || Sbjct 672 TGGCCGGTAAC--CTGAAGCAGTCCAATACCCTGCTGATTTTCATCAACCAGATCCGTAT 729 Query 65150 GAAGATCGGCA--ACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGCAAGGCTTTG 65207 ||| || || | || | || |||| || |||||||| || || || || || Sbjct 730 GAAAATTGGTGTGATGTTTGGTAA--CCCG---GAAACCACCACTGGTGGTAACGCGCTG 784 Query 65208 AGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGAT 65267 | |||||||||||| ||||| | ||| |||| || |||| | || || |||||| Sbjct 785 AAGTTCTACGCCTCTGTCCGTCTTGATATCCGCCGTATCGGTGCAATCAAAGAGGGCGAT 844 Query 65268 GAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCAC 65327 | | ||||||| ||||| || || || || || ||||| | ||| |||| | Sbjct 845 AACGTGGTCGGCAGTGAGACCCGCGTTAAAGTGGTGAAAAACAAAATCGCCGCGCCATTC 904 Query 65328 CGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATC-TCGCGTGAGGTCGAACTCCT 65386 | || |||||| || ||||||| || || ||| | | ||| || || | Sbjct 905 AAACAGGCTGAGTTCCAGATCATGTACGGCGAAGGTATCAATACCTTTGGT-GAGCTGGT 963 Query 65387 CGACCTGGCCGTGTCGCAGGGCCTG-GTGAAGAAGTCGGGCGCCTGGTTCAAGTAC---G 65442 |||||||| |||| ||| ||| |||| ||| |||| || |||| || ||| | Sbjct 964 CGACCTGGGCGTGAAGCACAAGCTGATTGAAAAAG-CGGGTGCATGGTACAGCTACAATG 1022 Query 65443 GGGACAAGA 65451 | ||||||| Sbjct 1023 GCGACAAGA 1031 >seq430283 Length=268 Score = 86.0 bits (94), Expect = 3e-12 Identities = 111/152 (73%), Gaps = 6/152 (4%) Strand=Plus/Plus Query 64809 CAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTA- 64867 ||||||||||| |||| ||| || | |||||| || |||||| | || ||||| | ||| Sbjct 16 CAGAAGGCCGGCGGCACCGCGGCGTTCATCGATGCCGAGCACGCGCTCGACCCGGTGTAT 75 Query 64868 --CGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGC 64925 ||||| |||||| || || |||| | || || | |||||||| || ||| Sbjct 76 GCGGCCAA---GCTCGGCGTCAACGTCGAGGATCTGCTGCTCAGCCAGCCGGATACCGGC 132 Query 64926 GAGCAGGCCCTGGAGATCGTTGACCTCCTCGT 64957 |||||||| |||||||||| ||| | || || Sbjct 133 GAGCAGGCGCTGGAGATCGCCGACATGCTGGT 164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235903118889151